Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c21r
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.2  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    23   2.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   3.8  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 571  IGTSSLASQRHQAFDIRLGCRMASCLSWTGDLDSFMVRC 455
            +G   + S R +A  I+        ++WT DLD F  RC
Sbjct: 939  VGFEDIKSVRDKAEYIKTK-GFGGAVAWTIDLDDFSNRC 976


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 508 MASCLSWTGDLDSFMVRC 455
           MA  + WT D+D F+  C
Sbjct: 346 MAGLMIWTVDMDDFLGLC 363


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 24  RSMSRGFNCVRNQTYFYGNLIPPYP 98
           R+ S+  + + N+ YFY +L  PYP
Sbjct: 235 RNFSKQASEILNE-YFYSHLSNPYP 258


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 271 FLHSIRLPHTTEDIGCL 221
           FLHS+R+     +I CL
Sbjct: 9   FLHSVRIVFVQSEIFCL 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,009
Number of Sequences: 336
Number of extensions: 3186
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)