Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10c19f
(654 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 25 0.54
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 25 0.54
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.72
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.72
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 23 2.9
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 23 2.9
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 23 2.9
AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory recept... 22 3.8
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 22 3.8
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 25.0 bits (52), Expect = 0.54
Identities = 20/82 (24%), Positives = 33/82 (40%)
Frame = +2
Query: 236 VKYLNEQKKAGERHETMSNKDALMFPLVASCALFGLYIFFQFFSKEYINLLLTGYFFFLG 415
+K+ + H+T+ N M P+ A C L GL + K + + YF+F
Sbjct: 2 IKFSKVKSYFTTHHDTLHNIYTSMKPVYAICKLIGLNT-LRIGRKGELKQHKSDYFYFSF 60
Query: 416 VLALSHLLSPIISFLVPASIPN 481
+ LLS F + + N
Sbjct: 61 YITSYTLLSVYSLFRIATNENN 82
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 25.0 bits (52), Expect = 0.54
Identities = 20/82 (24%), Positives = 33/82 (40%)
Frame = +2
Query: 236 VKYLNEQKKAGERHETMSNKDALMFPLVASCALFGLYIFFQFFSKEYINLLLTGYFFFLG 415
+K+ + H+T+ N M P+ A C L GL + K + + YF+F
Sbjct: 2 IKFSKVKSYFTTHHDTLHNIYTSMKPVYAICKLIGLNT-LRIGRKGELKQHKSDYFYFSF 60
Query: 416 VLALSHLLSPIISFLVPASIPN 481
+ LLS F + + N
Sbjct: 61 YITSYTLLSVYSLFRIATNENN 82
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.72
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 248 NEQKKAGERHETMSNKDALMFPLVASCALFGLYIFFQFFSKEYINL 385
N+++KA + +D +F ALF L +F K+Y+++
Sbjct: 1250 NKEEKARIAADLKELRDQSVFAFFMMNALFVLIVFLLTLKKDYLHI 1295
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 24.6 bits (51), Expect = 0.72
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 248 NEQKKAGERHETMSNKDALMFPLVASCALFGLYIFFQFFSKEYINL 385
N+++KA + +D +F ALF L +F K+Y+++
Sbjct: 1250 NKEEKARIAADLKELRDQSVFAFFMMNALFVLIVFLLTLKKDYLHI 1295
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 22.6 bits (46), Expect = 2.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 146 PPSSIEGIAIAYLSLVIMAILPIFFGSFRSVKYLNEQKKAGERHETMSNK 295
P + I I Y S V++ L FF K LN K + ET+++K
Sbjct: 65 PLAKITTILQRYCS-VLLVFLTYFFNILFRKKLLNAVKILSKIDETLNSK 113
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 22.6 bits (46), Expect = 2.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 146 PPSSIEGIAIAYLSLVIMAILPIFFGSFRSVKYLNEQKKAGERHETMSNK 295
P + I I Y S V++ L FF K LN K + ET+++K
Sbjct: 61 PLAKITTILQRYCS-VLLVFLTYFFNILFRKKLLNAVKILSKIDETLNSK 109
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 22.6 bits (46), Expect = 2.9
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +1
Query: 238 EISKRAKESRRAS*NNVQQRCS 303
E +KR++++RRA + + RC+
Sbjct: 147 EAAKRSRDARRAKEDEIAIRCA 168
>AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory receptor
candidate 31 protein.
Length = 250
Score = 22.2 bits (45), Expect = 3.8
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 441 VRSSRSWYQLRYQTFRSIFISPVV 512
V+++ W QLRY+ +R +S ++
Sbjct: 135 VKNTALWKQLRYEHYRLYQLSVLI 158
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 22.2 bits (45), Expect = 3.8
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 311 PLVASCALFGLYIFFQFFSKEYINLLLTGYFFFLGVLALSHLL 439
PL ++ Y F F+ + LL +FF ++ HLL
Sbjct: 139 PLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLL 181
Score = 21.8 bits (44), Expect = 5.1
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 359 FFSKEYINLLLTGYFFFLGVLALSHL--LSPIISFLVP 466
+F +I LL YF++ ++ HL L I F+VP
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVP 139
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,168
Number of Sequences: 336
Number of extensions: 3463
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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