Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c18f
         (659 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    31   0.032
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   8.5  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 31.1 bits (67), Expect = 0.032
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = -2

Query: 364 NDLNERSGLAWCDWSNDNRG------GHDWLSDSTTVGKREVDDFGSEDRLLYGVESDED 203
           N++   S L+W  +   + G      G  W  + T+ G +E++DF SED  +    S +D
Sbjct: 212 NNIERDSALSW-QYFGSSTGFLRRFPGTAWPPE-TSYGSKEINDFRSEDWFIQAASSPKD 269

Query: 202 FVQMLEKESS 173
            + +L+   S
Sbjct: 270 VIILLDSSGS 279


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 121 AASHSGRYPQPQHRPSH 171
           ++SHS    QP H P H
Sbjct: 344 SSSHSHSQAQPHHNPHH 360


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,747
Number of Sequences: 2352
Number of extensions: 9412
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)