Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c16r
         (690 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7NBF2 Cluster: Tetratricopeptide repeat domain; n=11; ...    38   0.18 
UniRef50_A4VGJ0 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  
UniRef50_A7TQT9 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  

>UniRef50_A7NBF2 Cluster: Tetratricopeptide repeat domain; n=11;
           Francisella tularensis|Rep: Tetratricopeptide repeat
           domain - Francisella tularensis subsp. holarctica FTA
          Length = 582

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
 Frame = +3

Query: 9   SSYKS-LVCTKEPLGIDKLEYKIYYILGILCNFILTKHFQSHSFYKQYK-LTSGKVQKLF 182
           S YK+  V  KE +  D+   K Y+ LG +  + L      +  YK YK   +G   K F
Sbjct: 69  SGYKNAFVILKELVEDDQATAKDYFYLGYIYQYGLGTEKNYYDAYKNYKKAANGNYPKAF 128

Query: 183 YHLATPRKNGVG 218
           Y +AT  ++G+G
Sbjct: 129 YQIATLYRDGLG 140


>UniRef50_A4VGJ0 Cluster: Putative uncharacterized protein; n=1;
           Pseudomonas stutzeri A1501|Rep: Putative uncharacterized
           protein - Pseudomonas stutzeri (strain A1501)
          Length = 549

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 18/68 (26%), Positives = 31/68 (45%)
 Frame = +3

Query: 48  GIDKLEYKIYYILGILCNFILTKHFQSHSFYKQYKLTSGKVQKLFYHLATPRKNGVGRVY 227
           G  +L + +++ L +  N +L     + SFY  +   S     L  H   P     GR+Y
Sbjct: 92  GAGRLRFWMFWQLAVAGNLLLIIATDALSFYLGFSAMSLSAYGLIVHRGGPGPRRAGRLY 151

Query: 228 LKLSVKAE 251
           L+L++  E
Sbjct: 152 LQLAICGE 159


>UniRef50_A7TQT9 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 495

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 18/64 (28%), Positives = 33/64 (51%)
 Frame = +3

Query: 51  IDKLEYKIYYILGILCNFILTKHFQSHSFYKQYKLTSGKVQKLFYHLATPRKNGVGRVYL 230
           +D LEY+ YY+ G L NF    +  +  +  + K ++ KV+K+   +  P     G + L
Sbjct: 10  LDNLEYQYYYLKGTLDNFTPRLNSTTKLYNAKGKKSAKKVEKVLAEITLPEVES-GLLEL 68

Query: 231 KLSV 242
           +L +
Sbjct: 69  RLEI 72


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,154,639
Number of Sequences: 1657284
Number of extensions: 10969059
Number of successful extensions: 25342
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25332
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)