Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c16r
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   3.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.5  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 87   LKYNIFYTRVYLYLEVPSCKLRIYNYSIF 1
            LKY + Y     Y+ VPS  L +  YS+F
Sbjct: 1002 LKYGVIY-----YVTVPSMYLLLVIYSVF 1025


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 87   LKYNIFYTRVYLYLEVPSCKLRIYNYSIF 1
            LKY + Y     Y+ VPS  L +  YS+F
Sbjct: 1002 LKYGVIY-----YVTVPSMYLLLVIYSVF 1025


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 410 NV*NIDDEVLKFDIFCGISSIDLCKLGI 493
           N+ NID  VL+   FC +  +   K+G+
Sbjct: 544 NLKNIDLTVLESGAFCKMQPLRTLKIGV 571


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 66  YKIYYILGILCNFILTKHFQSHSF 137
           YK + I GIL N ++T  F  HSF
Sbjct: 81  YKAFKI-GILLNQLITPLFFFHSF 103


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 27  VCTKEPLGIDKLEYKIYY 80
           VCTKE +  D  +  +YY
Sbjct: 442 VCTKEGIVRDPSDCSVYY 459


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,710
Number of Sequences: 336
Number of extensions: 3300
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)