Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c16r
         (690 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    23   3.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.3  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   6.3  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   6.3  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   6.3  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   6.3  

>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 482 YTNLYSKFHKIYQTLKLRRRYFRHSTKKRK 393
           Y  LY++  K+ +    R+RY R   +++K
Sbjct: 19  YEKLYNEKEKLLEERTSRKRYSRSREREQK 48


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 482 YTNLYSKFHKIYQTLKLR 429
           Y NLY+K+H  Y   +++
Sbjct: 718 YANLYTKYHGQYPNTQIQ 735


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 491 YLVYTNLYSKFHKIYQTLKLRRRYFRHSTKKRKIIY 384
           Y+V TN  SK+ + Y   + +  YF    +     Y
Sbjct: 200 YIVNTNYSSKYMREYNDPEYKLDYFMEDVELNAYYY 235


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 482 YTNLYSKFHKIYQTLKLRRRYFRHSTKKRK 393
           Y  LY++  K  +    R+RY R   +++K
Sbjct: 19  YEKLYNEKEKFLEEKTSRKRYSRSREREQK 48


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 482 YTNLYSKFHKIYQTLKLRRRYFRHSTKKRK 393
           Y  LY++  K  +    R+RY R   +++K
Sbjct: 19  YEKLYNEKEKFLEEKTSRKRYSRSREREQK 48


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 482 YTNLYSKFHKIYQTLKLRRRYFRHSTKKRK 393
           Y  LY++  K  +    R+RY R   +++K
Sbjct: 19  YEKLYNEKEKFLEEKTSRKRYSRSREREQK 48


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 482 YTNLYSKFHKIYQTLKLRRRYFRHSTKKRK 393
           Y  LY++  K  +    R+RY R   +++K
Sbjct: 19  YEKLYNEKEKFLEEKTSRKRYSRSREREQK 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,538
Number of Sequences: 438
Number of extensions: 3774
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)