Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c15r
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    29   0.052
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   4.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   6.0  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   7.9  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 28.7 bits (61), Expect = 0.052
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = +3

Query: 501 PEYPTWAKLEVDQSQFRS*ISAPSLALWSRTFCPVPPLGRSHRPASAVS 647
           P Y TW+ ++   +     + +P++  WS T  P PP   S +P  + S
Sbjct: 302 PTYSTWSTVQTPTT-----VMSPTINCWSLTSSPPPPYQISAQPTPSQS 345


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/46 (21%), Positives = 26/46 (56%)
 Frame = -1

Query: 570 TVPKFKIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVS 433
           T+ +  +++   +  +LP+  ++A  + +N   T++ D+D  L V+
Sbjct: 13  TMARTPLKSSFSISSILPETALEAPKSPENHPETELSDSDCDLDVT 58


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 200 TVGIKYKFVYRLFY 241
           TVG+ Y F  R+FY
Sbjct: 30  TVGVVYSFKRRIFY 43


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
 Frame = -3

Query: 637 EAGRWLRPNGGTGQNVLD--QSASDGAE 560
           +AG W R   G G N  D  Q  S G +
Sbjct: 44  DAGEWFRLVAGEGDNCRDVIQCTSSGLQ 71


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = -1

Query: 738 DLNAQL---LEMAYEG-NDASMVIVLPNEINGLDGILQKLADGYDLTAELDKMFS 586
           D++A L   +  A+ G ND   +++L N  +  +G LQK+A        L  +FS
Sbjct: 44  DIDANLCTHVNYAFLGLNDDGSLLILDNATDITNGGLQKVAALKKTNPALKALFS 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,463
Number of Sequences: 336
Number of extensions: 3640
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)