Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10c15r
(741 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 56 2e-08
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 46 3e-05
At1g64030.1 68414.m07252 serpin family protein / serine protease... 39 0.003
At1g64010.1 68414.m07250 serpin, putative / serine protease inhi... 35 0.049
At5g25930.1 68418.m03081 leucine-rich repeat family protein / pr... 29 2.4
At3g01770.1 68416.m00116 DNA-binding bromodomain-containing prot... 29 3.2
At5g62050.1 68418.m07788 OXA1 protein (OXA1) identical to AtOXA1... 27 9.9
At3g44790.1 68416.m04823 meprin and TRAF homology domain-contain... 27 9.9
At2g41450.1 68415.m05121 GCN5-related N-acetyltransferase (GNAT)... 27 9.9
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 56.0 bits (129), Expect = 2e-08
Identities = 49/142 (34%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Frame = -1
Query: 690 SMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVRV-TVPKFKIETEIDLLQVLPK 514
SM I LPN+ GL +L+K+ + V +PKFK E + +VL
Sbjct: 170 SMYIYLPNDKEGLAPLLEKIGSEPSFFDNHIPLHCISVGAFRIPKFKFSFEFNASEVLKD 229
Query: 513 LGIQAIFNRQNSGLTKILD---NDEPLYVSKAVQKAFIEVNXXXXXXXXXXAMVVSGGIT 343
+G+ + FN GLT+++D N + LYVS + KA IEV+ A VS G+
Sbjct: 230 MGLTSPFN-NGGGLTEMVDSPSNGDDLYVSSILHKACIEVD-----EEGTEAAAVSVGVV 283
Query: 342 SAGGQFIRY--FVANRPFLAAI 283
S F R FVA+RPFL +
Sbjct: 284 SC-TSFRRNPDFVADRPFLFTV 304
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 46.0 bits (104), Expect = 3e-05
Identities = 45/144 (31%), Positives = 62/144 (43%), Gaps = 8/144 (5%)
Frame = -1
Query: 690 SMVIVLPNEINGLDGILQKLADGYDLTAELDKMFSTKVR-VTVPKFKIETEIDLLQVLPK 514
SM LP+ NGL +L K+ KVR +PKFK D VL
Sbjct: 235 SMYFYLPDANNGLSDLLDKIVSTPGFLDNHIPRRQVKVREFKIPKFKFSFGFDASNVLKG 294
Query: 513 LGIQAIFNRQNSGLTKILDNDE---PLYVSKAVQKAFIEVNXXXXXXXXXXAMVVSGGIT 343
LG+ + F+ + GLT+++++ E L VS KA IEVN A S G+
Sbjct: 295 LGLTSPFSGE-EGLTEMVESPEMGKNLCVSNIFHKACIEVN-----EEGTEAAAASAGVI 348
Query: 342 SAGGQFIRY----FVANRPFLAAI 283
G + FVA+ PFL +
Sbjct: 349 KLRGLLMEEDEIDFVADHPFLLVV 372
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = -1
Query: 690 SMVIVLPNEINGLDGILQKLAD--GYDLTAELDKMFSTKVRVTVPKFKIETEIDLLQVLP 517
SM LP++ +GLD +L+K+A G+ L + + + +PKFKIE + VL
Sbjct: 238 SMYFYLPDKKDGLDDLLEKMASTPGF-LDSHIPTYRDELEKFRIPKFKIEFGFSVTSVLD 296
Query: 516 KLGIQAI 496
+LG++++
Sbjct: 297 RLGLRSM 303
>At1g64010.1 68414.m07250 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 185
Score = 35.1 bits (77), Expect = 0.049
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Frame = -1
Query: 705 EGNDAS----MVIVLPNEINGLDGILQKLADGYDLTAELDKMF-STKVRV---TVPKFKI 550
+GND S M LP+E +GLD +++K+A LD S KV+V +PKFKI
Sbjct: 43 QGNDTSRNFSMHFYLPDEKDGLDNLVEKMASSVGF---LDSHIPSQKVKVGEFGIPKFKI 99
Query: 549 ETEIDLLQVLPKLGI 505
E + +LG+
Sbjct: 100 EFGFSASRAFNRLGL 114
>At5g25930.1 68418.m03081 leucine-rich repeat family protein /
protein kinase family protein contains similarity to
Swiss-Prot:P47735 receptor-like protein kinase 5
precursor [Arabidopsis thaliana]; contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1005
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = -1
Query: 672 PNEINGLDGILQKLADGYDLTAEL-DKMFSTK--VRVTVPKFKIETEID-LLQVLPKLGI 505
P E+ L ++ D DLT EL D++ S K + +++ K K+ EI L +LP+L
Sbjct: 489 PKELTSLSNLISIFLDENDLTGELPDEIISWKSLITLSLSKNKLSGEIPRALGLLPRLLN 548
Query: 504 QAIFNRQNSG 475
+ Q SG
Sbjct: 549 LDLSENQFSG 558
>At3g01770.1 68416.m00116 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 620
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 625 IGQLLQYPVQAINFVRQHDN 684
+G L ++PVQ INF+R H +
Sbjct: 292 LGSLTEFPVQIINFLRDHSS 311
>At5g62050.1 68418.m07788 OXA1 protein (OXA1) identical to AtOXA1
[Arabidopsis thaliana] GI:6624207
Length = 429
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -2
Query: 461 WITTSRCT--YPRLCKKPSLKSTRKAPKQPPPQP 366
WIT++ + Y + K+P +K + P PPP P
Sbjct: 329 WITSNLFSLMYGLVIKRPQVKKMLRIPDLPPPPP 362
>At3g44790.1 68416.m04823 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 324
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -1
Query: 555 KIETEIDLLQVLPKLGIQAIFNRQNSGLTKILDNDEPLYVSKAV 424
KI E+D+LQV+ KL + L +I ND+ + V +++
Sbjct: 120 KIVVEVDVLQVIGKLDVSEGSQEVTQPLKRIRLNDDGVSVKQSI 163
>At2g41450.1 68415.m05121 GCN5-related N-acetyltransferase (GNAT)
family protein low similarity to Swift [Xenopus laevis]
GI:14164561; contains Pfam profiles PF00583:
acetyltransferase, GNAT family, PF00533: BRCA1 C
Terminus (BRCT) domain
Length = 991
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Frame = -1
Query: 330 QFIRYFVANRPFLAAIHVREIP------CFLAHF----RG*NNRYTNLYFIPTVKPLSLY 181
+ +RY + N L + +R + CFL RG N+ Y+ + + T PLSL
Sbjct: 538 KIVRYLLQNSAILKKLTIRLVKRSWKAECFLEDLCCIQRGSNSSYSRKFLLITFLPLSLA 597
Query: 180 *SVFKITW 157
F + W
Sbjct: 598 CLAFLLQW 605
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,449,326
Number of Sequences: 28952
Number of extensions: 318689
Number of successful extensions: 1003
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -