Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c14r
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   0.58 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.3  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.4  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.1  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.1  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   9.4  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 25.0 bits (52), Expect = 0.58
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 340 LGYYDTLLDNSTLLDVW 390
           L YY T  D +T+LD W
Sbjct: 310 LAYYSTTCDIATILDFW 326


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -1

Query: 120 FFQNALVGIVSFGKSNANDIYPVVLTSISSFTEWILQN 7
           + QN + G++  G S  N       +S +   EW+ QN
Sbjct: 402 YHQNEVGGVIDDGGSGQNQPESPESSSSTPRHEWVAQN 439


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -3

Query: 652 IPTHLESMVPTVRWYCSHQLPLPF 581
           +  HL S   T+ W+  HQ   P+
Sbjct: 122 VVNHLSSDSTTIHWHGHHQKNSPY 145


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 675 PSLVQIEVFLPILNQW 628
           P +  IE ++P+L QW
Sbjct: 496 PLITLIETWMPLLPQW 511


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 150 SRGHQPGPNRRRICYQSRRDHDPCTV 227
           S+  + G N   + Y S   HD CTV
Sbjct: 129 SQADRDGKNYPAVPYGSGDFHDSCTV 154


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 150 SRGHQPGPNRRRICYQSRRDHDPCTV 227
           S+  + G N   + Y S   HD CTV
Sbjct: 130 SQADRDGKNYPAVPYGSGDFHDSCTV 155


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 150 SRGHQPGPNRRRICYQSRRDHDPCTV 227
           S+  + G N   + Y S   HD CTV
Sbjct: 130 SQADRDGKNYPAVPYGSGDFHDSCTV 155


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = -1

Query: 600 TNYHYLSTATCFHGEFYDPAYRRI 529
           T  HY      + GE Y+P +  +
Sbjct: 301 TQQHYQMNQNMYPGEMYNPEHTTV 324


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = -1

Query: 600 TNYHYLSTATCFHGEFYDPAYRRI 529
           T  HY      + GE Y+P +  +
Sbjct: 249 TQQHYQMNQNMYPGEMYNPEHTTV 272


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = -1

Query: 600 TNYHYLSTATCFHGEFYDPAYRRI 529
           T  HY      + GE Y+P +  +
Sbjct: 432 TQQHYQMNQNMYPGEMYNPEHTTV 455


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = +3

Query: 486 KIFHRAHCDGKIQR*CDGMQDRRILHGNR 572
           K  HR+  D K     D +   RILH  R
Sbjct: 23  KTLHRSTRDDKYTTRYDNVDVDRILHSKR 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,876
Number of Sequences: 336
Number of extensions: 4441
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)