Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10c11r
(796 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.19
SPAC1705.03c ||SPAC23H4.19|conserved fungal family|Schizosacchar... 31 0.25
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.25
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 30 0.44
SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr ... 29 0.77
SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated prote... 28 1.3
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 28 1.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.8
SPBC32F12.01c ||SPBC685.10c|inositol phosphosphingolipid phospho... 27 3.1
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 27 4.1
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 27 4.1
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 5.4
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 26 5.4
SPBC25H2.08c |mrs2||magnesium ion transporter Mrs2|Schizosacchar... 26 7.1
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 26 7.1
SPAC15A10.06 |||CPA1 sodium ion/proton antiporter|Schizosaccharo... 25 9.4
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 25 9.4
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 25 9.4
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 25 9.4
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.1 bits (67), Expect = 0.19
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +1
Query: 337 SSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYSTQL 480
SS S++ S+ STS S SS +S ST ++ SSS+S+ +S+ L
Sbjct: 274 SSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTL 321
Score = 30.7 bits (66), Expect = 0.25
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +1
Query: 301 STMGLTT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYST 474
ST+ ++ + SS S+T S+ +S+S S S +S ST+TS SSS A S+
Sbjct: 341 STISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSS 398
Score = 29.1 bits (62), Expect = 0.77
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 337 SSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNS 459
SS S++ S+ STS S SS +S ST++S SSS+S
Sbjct: 291 SSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSS 331
Score = 27.9 bits (59), Expect = 1.8
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 301 STMGLTT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYS 471
S+ LT+ + SS +T S+ STS + S SS ++ S+ +S SSS+S+ S
Sbjct: 226 SSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSS 282
>SPAC1705.03c ||SPAC23H4.19|conserved fungal
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 30.7 bits (66), Expect = 0.25
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 337 SSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAG 465
+SGSAT +TG +T+ ++S S +S S+ S S+ +AG
Sbjct: 365 TSGSATSATGSATTTSYSSDSSASSSSSSSHESSAASNGFTAG 407
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 30.7 bits (66), Expect = 0.25
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +1
Query: 334 KSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAG 465
KSS S++ S+ S S + SKSS S S ITS P+SS+S+G
Sbjct: 197 KSSSSSSSSSKSSASPSSSKSSSKFS-SSSFITSTTPASSSSSG 239
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 29.9 bits (64), Expect = 0.44
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -3
Query: 413 IEAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVNPIVENSQSEYPGKRY 267
+EA+ E + + DLP +VA PE++ V +NP+ ++ E R+
Sbjct: 219 MEAEAEAVTLEMIGDLPFAHVAPPENVLFVCKLNPVTQDEDLELIFSRF 267
>SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 29.1 bits (62), Expect = 0.77
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -3
Query: 548 NIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLV 429
N++++ K E + S +G+I P +DED N ++
Sbjct: 89 NLIEQETAKNKEMLNVVSSIGNIVHDSVPVSMDEDNNEII 128
>SPBC31E1.01c |atg2|mug36, SPBC660.18c|autophagy associated protein
Mug36|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1646
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = -3
Query: 575 DADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPE 396
D D+ + IVD+ +NE + S++ S+S E+ + +DG+ I+D+ E Q E
Sbjct: 1059 DNDISSQEIKIVDDYYISSNEHSTHASDLASVSSEEF---VIDDGSS-SIIDISDELQDE 1114
Query: 395 DLEKAQL 375
+ L
Sbjct: 1115 SSSRDSL 1121
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = +1
Query: 115 RIHKLLVKKYKRINYLYKKCYLLNTEKL 198
R+ L+++K + IN+ ++C L TEK+
Sbjct: 284 RLESLILEKQEEINFWKQRCRALETEKI 311
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +1
Query: 316 TT*TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYSTQLIEP 489
+T + + S S++ S+ STS + S SS ++ ++ +SP SS+ + ST L P
Sbjct: 571 STFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSSISSSSTILSSP 628
Score = 27.1 bits (57), Expect = 3.1
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 325 TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRST--ITSPFPSSSNSAGYSTQLI 483
T L S S+T ST S S + S SS +SI S+ ++SP PS+S+ S+ +I
Sbjct: 590 TSLSISSSSTSSTFSSASTS-SPSSISSSISSSSTILSSPTPSTSSLMISSSSII 643
Score = 25.8 bits (54), Expect = 7.1
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 319 T*TGLKSS---GSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYSTQLIEP 489
T TG ++S GS T S S+SW SS + + +P SSS S+ S+ ++P
Sbjct: 906 TSTGSETSSVVGSGTDSA-TSSSWTAETSSSAITSSVAASVTPTSSSSASSWSSSSEVDP 964
>SPBC32F12.01c ||SPBC685.10c|inositol phosphosphingolipid
phospholipase C |Schizosaccharomyces pombe|chr
2|||Manual
Length = 424
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 311 PIVENSQSEYPGKRYPDATWR 249
PI+E+S ++YP P A WR
Sbjct: 89 PIIESSMNKYPLNGRPQAFWR 109
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 331 LKSSGSATF-STGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYSTQLI 483
+ S+G++T ST ST + + + + +T P PS+S+ Y+T+ I
Sbjct: 235 ITSTGASTVTSTQPSTVTSTQRKNTATTTKTTTYVGPSPSASSVVAYTTKCI 286
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 26.6 bits (56), Expect = 4.1
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -3
Query: 377 LVDLPVENVAEPEDLSP--VQVVNPIVENSQSEYPGKR 270
L+DL +VAEP D P QV + V++S S +P +
Sbjct: 429 LMDLASLSVAEPRDSQPSVSQVNDTFVKSSDSTFPSSQ 466
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 26.2 bits (55), Expect = 5.4
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 325 TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYST 474
+ + SS SAT + S+S S SS + S ITS SSS + S+
Sbjct: 46 SSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSS 95
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 358 STGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYST 474
S+ S++ + S SS +S +T TSP SSS+S+ S+
Sbjct: 129 SSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSS 167
>SPBC25H2.08c |mrs2||magnesium ion transporter
Mrs2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 422
Score = 25.8 bits (54), Expect = 7.1
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -3
Query: 458 ELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVNPIVENSQS 288
E D+D G+ + + +P DL+K V+L +E + D VQ + +V N +S
Sbjct: 260 EQDQDLAGMYLTERLKTGKPRDLDKHDEVELLLETYCKQVD-EIVQQTDNLVGNIRS 315
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 25.8 bits (54), Expect = 7.1
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 539 DEPVEKTNEEIENDSEVGSISWVEYP--AELDEDGNGLVIVDLPIEAQ 402
+E EKT+ E +ND E+ + +E AE +D + L ++ IE Q
Sbjct: 133 EEQEEKTDNEDDNDVEISTQESLENNGLAEKKDDTSSLATLEDDIEGQ 180
>SPAC15A10.06 |||CPA1 sodium ion/proton
antiporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.4 bits (53), Expect = 9.4
Identities = 9/35 (25%), Positives = 21/35 (60%)
Frame = -3
Query: 512 EIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIE 408
++++D+E+G + W + P E D + + + + D E
Sbjct: 457 DVDSDTEIGMLPWQQSP-EFDLENSAMELSDASAE 490
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 25.4 bits (53), Expect = 9.4
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +1
Query: 325 TGLKSSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYSTQLIEP 489
T L + S T ST STS+ K S + T+TS S ++++P
Sbjct: 302 TDLSAKESLTSSTRLSTSYKTRKRSSGVAFSSETVTS--SSKERKRSVENEMLKP 354
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 25.4 bits (53), Expect = 9.4
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = -3
Query: 410 EAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVNPIVENSQSE---YPGKRYPDA 258
EA E+ + D VE ++P DL+ + + NSQ E GK Y D+
Sbjct: 11 EAPLEENSPPRFFDSDVEADSKPNDLTAANSIVDLKTNSQHENANAAGKEYGDS 64
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 569 DLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDED 444
DLQ + E ++ NE++E+ E+GSI ++ +D D
Sbjct: 358 DLQEKMQEVNAEKLQHENEKLESSHELGSIRTLKAQKLIDLD 399
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,810,823
Number of Sequences: 5004
Number of extensions: 56034
Number of successful extensions: 218
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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