Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10c11r
(796 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1303 + 35572403-35572624,35572744-35572860,35572987-355731... 33 0.35
09_06_0127 + 21019266-21019670 31 1.4
08_02_0657 - 19749835-19751942,19753123-19753561 30 1.8
03_05_0175 + 21513767-21513903,21534361-21535385,21537375-215375... 30 1.8
03_02_0589 + 9673928-9674123,9674557-9674713,9675588-9675669,967... 30 1.8
01_02_0019 + 10262685-10262909,10263014-10263076,10263155-102633... 30 1.8
11_06_0388 + 23048576-23051546,23051830-23052371,23052444-230525... 30 2.4
08_02_0396 - 16654603-16655030,16655803-16655906,16655988-166565... 30 2.4
02_01_0348 - 2506007-2506909,2507003-2508120,2508230-2508883,250... 30 2.4
07_01_0975 + 8223269-8224354 29 3.2
07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467 29 3.2
05_07_0140 - 27982037-27983794 29 3.2
05_06_0152 - 26008495-26009074,26010555-26011361,26016536-260166... 29 3.2
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 29 4.3
01_07_0374 + 43144861-43144998,43145695-43145794,43146499-431466... 29 4.3
12_02_0035 - 12563503-12564405,12564494-12565611,12565709-125662... 29 5.6
01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055 29 5.6
06_03_1180 + 28218386-28218649,28218725-28219202,28219309-282196... 28 7.4
04_04_1457 - 33741048-33741146,33741647-33741760,33741938-337420... 28 7.4
01_01_0762 + 5889925-5890136,5891110-5891273,5891755-5891878,589... 28 7.4
02_05_0740 - 31404004-31404180,31404365-31405261,31405351-314059... 28 9.8
>02_05_1303 +
35572403-35572624,35572744-35572860,35572987-35573112,
35573217-35573279,35573837-35573944,35574587-35574664,
35574772-35574864,35575206-35575292,35575429-35575530,
35575617-35575736,35575839-35575901,35575974-35576119,
35576203-35576296,35576399-35576457,35576568-35576607,
35576694-35576785,35576877-35576946,35578172-35578333,
35578477-35578703,35578863-35579070,35579173-35579258,
35579450-35579541,35579674-35579870
Length = 883
Score = 32.7 bits (71), Expect = 0.35
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Frame = -3
Query: 566 LQVAPVNIVDEPVEKTN-----EEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQ 402
LQ N +EPV+++ EE E + E E P E ++ +G+ VD I +
Sbjct: 385 LQQDEPNYDEEPVDRSKHWGDLEEEEEEEEEEEEEEEEEPMEDEDMEDGMQSVDT-ISST 443
Query: 401 PEDLEKAQLVDLPVENVAEPEDLSPVQVVNPIVENSQSEYPGKRY 267
P +E ++DL EPE + Q+ + + + PG Y
Sbjct: 444 PTGVETPDVIDLRKLQRKEPEKQTEKQLYQILEQKEERIAPGAIY 488
>09_06_0127 + 21019266-21019670
Length = 134
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 340 SGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSA 462
SGS+T +TG + S A S SS AS RS P P + +A
Sbjct: 44 SGSSTSTTGTTPSAAASGSSSTASSSRSVNAPPPPPTPTAA 84
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -3
Query: 599 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAE 456
D +AP + +L V + +V +P KT E+E ++E + + E A+
Sbjct: 769 DEEEAPATEPELPVGQLRLVAKPKTKTKAELEAEAEAAAKAKAEAEAK 816
>03_05_0175 +
21513767-21513903,21534361-21535385,21537375-21537547,
21537849-21538679
Length = 721
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = -3
Query: 542 VDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLP 363
V+E +E+ EEIE + E E E+DE+ G + ++ ED +++ +P
Sbjct: 74 VEEEIEEEEEEIEEEEEEVREEVQEAGEEVDEEQQG---ANEEMQKSKEDADESSKSAIP 130
Query: 362 VENVAEPE 339
V+ E E
Sbjct: 131 VQKQEEDE 138
>03_02_0589 +
9673928-9674123,9674557-9674713,9675588-9675669,
9675759-9675806,9676566-9676666,9676871-9676979,
9677004-9677093
Length = 260
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = -3
Query: 566 LQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLE 387
L+ + V + + V +T E + E+ IS E+ + DG +++ +P A PED+E
Sbjct: 120 LRFSSVPLFNTAVRQTREGRQYRLEM--ISREEFDLKQSYDGKAILLQGVPRNAVPEDIE 177
Query: 386 K----AQLVDLPVENVAEPEDLSPVQVV 315
+ + P E+ P P++VV
Sbjct: 178 RFLCGTNVEPPPFESFLRPGVPDPIRVV 205
>01_02_0019 +
10262685-10262909,10263014-10263076,10263155-10263316,
10263407-10263589,10263676-10263806,10264251-10264419,
10264524-10264653,10265702-10265898
Length = 419
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 575 DADLQVAPVNIVDEPVEKTNEEIENDSEVGSIS 477
+A+LQ ++ ++PV NEE ND +V S+S
Sbjct: 376 EAELQDEFPHVQEDPVSHANEEFPNDEDVDSLS 408
>11_06_0388 +
23048576-23051546,23051830-23052371,23052444-23052517,
23053006-23053090,23053281-23053367,23053585-23053657,
23053882-23053925,23054041-23054169,23054301-23054402,
23054529-23054585
Length = 1387
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -3
Query: 545 IVDEPVEKTNEEIENDS-EVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVD 369
I+ EP+E +E+I ++ + S + P E + I+ PI+AQ E + +
Sbjct: 330 IISEPIETQSEKIISEPIDTQSEKIISEPIETQSEK----IISEPIDAQSEKIISEPIEA 385
Query: 368 LPVENVAEPEDLSPVQVVNPIVENSQSE 285
+ ++EP D ++++ +E +QSE
Sbjct: 386 QSEKIISEPIDTQTEKIISDPIE-AQSE 412
>08_02_0396 -
16654603-16655030,16655803-16655906,16655988-16656579,
16656820-16656993,16657105-16657309
Length = 500
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3
Query: 371 DLPVENVAEPEDLSPVQVVNPIVENSQSE 285
D PVE++AE PVQ + ++EN+Q +
Sbjct: 94 DAPVESIAEEVLEEPVQCLETVIENTQEQ 122
>02_01_0348 -
2506007-2506909,2507003-2508120,2508230-2508883,
2508920-2509046
Length = 933
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 599 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSIS 477
D+ D VED D ++ N +E E+ +E ENDS S S
Sbjct: 331 DDDDVEVEDVDEEIGEENAEEEEEEEGADEEENDSSDDSDS 371
>07_01_0975 + 8223269-8224354
Length = 361
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 328 GLKSSGSATF-STGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSA 462
G SSG+A+ + G S S A + G +S G + SP PSSS SA
Sbjct: 301 GPSSSGAASGPAEGPSPSGAAGPAEGPSSYGSTEGPSPSPSSSGSA 346
>07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467
Length = 945
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -3
Query: 599 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDS---EVGSISWVEYPAELDEDGNGLV 429
D+ D VED D ++ N +E E+ +E ENDS S S + ++L E G+
Sbjct: 343 DDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDSGDDSDSSSSSSDNSSDLSESGDSKT 402
Query: 428 I 426
+
Sbjct: 403 V 403
>05_07_0140 - 27982037-27983794
Length = 585
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/77 (29%), Positives = 29/77 (37%)
Frame = +2
Query: 536 HPRCSQGRLVNRRPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRPXLEHRG 715
HPR N+RPQL R R + + R + E R R QN H P RG
Sbjct: 101 HPRFGPKWRFNQRPQLPQR---RDEEVEARRREAEKERARRERHFQNNRSHHHPGF--RG 155
Query: 716 FLRSLQSXPGNRHPHWS 766
S + P W+
Sbjct: 156 NQSSSAKSSVDIQPDWT 172
>05_06_0152 -
26008495-26009074,26010555-26011361,26016536-26016657,
26016860-26017462
Length = 703
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/73 (30%), Positives = 30/73 (41%)
Frame = +2
Query: 524 FQLVHPRCSQGRLVNRRPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRPXL 703
F + + +CS+G LVN LE R ++ H P L C+R L + RR
Sbjct: 239 FIIRNAQCSKGFLVNTFESLEPRVVNALRDSRCHHGGPALPPFYCIRPLVEKADERRDRA 298
Query: 704 EHRGFLRSLQSXP 742
E L L P
Sbjct: 299 ERHECLAWLDRQP 311
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 29.1 bits (62), Expect = 4.3
Identities = 29/106 (27%), Positives = 48/106 (45%)
Frame = -3
Query: 602 VDNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIV 423
+D++ A +D + V V D+ E ++ EN V S VE E DE N
Sbjct: 273 LDSILASSDDVNEAVKIVKGADDRNEISSSH-ENTDTVDQASHVEV-IEHDEHTNA---A 327
Query: 422 DLPIEAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVNPIVENSQSE 285
+ EA + + A +V+ + + EDLS + ++ NSQ+E
Sbjct: 328 ENDEEANRTEAQVATVVEREENTMVQLEDLSSMSIIVSNDSNSQNE 373
>01_07_0374 +
43144861-43144998,43145695-43145794,43146499-43146651,
43147383-43150081
Length = 1029
Score = 29.1 bits (62), Expect = 4.3
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = -3
Query: 530 VEKTNEEIENDSEVGSISWVEYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENV 351
+EK E E D GSIS E +DE N +V ++L + +Q +++ + +E+
Sbjct: 419 LEKIKEHFERD---GSISVAEITEHIDELVNKVVDLELMVSSQSSQIDRLCRENSELESC 475
Query: 350 ---AEPEDLSPVQVVNPIVENSQSE 285
E E++S VN ++ + E
Sbjct: 476 LQSLEEENVSDPDKVNEKLKKLEEE 500
>12_02_0035 -
12563503-12564405,12564494-12565611,12565709-12566239,
12566337-12567153
Length = 1122
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 599 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDS 495
D+ D VED D ++ N +E E+ +E ENDS
Sbjct: 343 DDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDS 377
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 599 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDS 495
D+ D VED D ++ N +E E+ +E ENDS
Sbjct: 520 DDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDS 554
>01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055
Length = 963
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 599 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDS 495
D+ D VED D ++ N +E E+ +E ENDS
Sbjct: 343 DDDDVEVEDIDEEIGEENAEEEEGEEGADEEENDS 377
>06_03_1180 +
28218386-28218649,28218725-28219202,28219309-28219697,
28219785-28220426,28220466-28221368
Length = 891
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 599 DNVDAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSIS 477
D+ D +ED D ++ N +E E+ +E ENDS S S
Sbjct: 318 DDDDVELEDVDEEIGEENAEEEEGEEGADEEENDSSDDSDS 358
>04_04_1457 - 33741048-33741146,33741647-33741760,33741938-33742052,
33742154-33742560,33743342-33743476,33743576-33743970,
33744225-33744916,33745014-33745097,33745195-33745286,
33745374-33745457,33745535-33745714,33746258-33746302,
33746399-33746692,33747199-33747585,33747713-33747899,
33748042-33748118,33748936-33749067,33749315-33749416,
33749744-33749827,33749902-33749992,33750105-33750178,
33750644-33750664,33751433-33751477,33752427-33752561,
33752693-33752752
Length = 1376
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 337 SSGSATFSTGRSTSWAFSKSSGCASIGRSTITSPFPSSSNSAGYSTQLI 483
SSG T + G STS A S+++ G S + + P S+ S+G Q++
Sbjct: 985 SSGPTTSNEGASTSGAASQTASGVLSG-SGVLNARPGSTTSSGLLAQMV 1032
>01_01_0762 +
5889925-5890136,5891110-5891273,5891755-5891878,
5891941-5892073,5892629-5892732,5892867-5895780,
5895876-5895965,5896251-5896355,5896633-5896740,
5896826-5896876
Length = 1334
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = -3
Query: 470 EYPAELDEDGNGLVIVDLPIEAQPEDLEKAQLVDLPVENVAEPEDLSPVQVVNPIVENSQ 291
E P+E D + L ++ E +PE K+++ +P NV P+ +V ++S
Sbjct: 426 EVPSETDNYVDALNTLESETETEPELQTKSRVKPVPSLNVDVPQVELIDNIVTESPDSSV 485
Query: 290 SEYP 279
+E+P
Sbjct: 486 AEFP 489
>02_05_0740 -
31404004-31404180,31404365-31405261,31405351-31405978,
31405997-31406468,31406575-31407052
Length = 883
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 590 DAPVEDADLQVAPVNIVDEPVEKTNEEIENDSEVGSIS 477
D VED D ++ N +E E+ +E ENDS S S
Sbjct: 233 DVEVEDVDEEIGEENAEEEEGEEGADEEENDSSDDSDS 270
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,163,896
Number of Sequences: 37544
Number of extensions: 326809
Number of successful extensions: 979
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 977
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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