Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c11f
         (622 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    31   0.039
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    30   0.052
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    26   1.1  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    26   1.1  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            26   1.1  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   1.9  
L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    24   4.5  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    24   4.5  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 30.7 bits (66), Expect = 0.039
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 477 TSMLQLRTPIYKSPL*TSWMNQLKRRMRKSRM 572
           TS L   TPI++SP    W N+  R ++K RM
Sbjct: 317 TSALLSCTPIFRSPPNPPWSNRTLRNLKKDRM 348


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 30.3 bits (65), Expect = 0.052
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = -3

Query: 401 QNQPG--HRRPQLEHRGFLRSLQSQPGNRHSQLELRHFLRSLQNQQGNRRCQREFQCQKS 228
           Q QP   H++P   H+G      SQ  +   Q  L  ++RS   ++  R+    +Q  + 
Sbjct: 200 QQQPNMMHQQPPPLHQGQQAPPNSQNASSGLQSPLYPWMRSQFERKRGRQTYTRYQTLEL 259

Query: 227 QRCLHFRSIQSRPRRV 180
           ++  HF    +R RR+
Sbjct: 260 EKEFHFNRYLTRRRRI 275


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = -3

Query: 452  PGHRRPQLEHRRCLRSLQNQPGHRRPQLEHRGFLRSLQSQPGNRHSQLELRH 297
            P H+  Q++ +   + LQ      + QL+ +   +  Q Q   +H Q +L+H
Sbjct: 1281 PTHQHSQIQLQPIQQPLQTLQHQYQQQLQQQQQQQQQQQQQHQQHQQHQLQH 1332


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -3

Query: 530  RCSQGRLVNRRPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPG-HRRPQLEHRGF 354
            +C+Q         +E RRC R  +N+    +  L+   C   +Q+    HR    E    
Sbjct: 998  QCNQYGQCPCNDNVEGRRCDRCKENKYDRHQGCLDCPACYNLVQDAANDHRAKLAELNQI 1057

Query: 353  LRSLQSQP 330
            L+ +QS+P
Sbjct: 1058 LQDIQSKP 1065


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = -3

Query: 500  RPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRPQLEHRGFLRSLQSQPGNR 321
            +PQ  HR   +  Q Q   ++ Q + ++  +  Q+QP   + QL     L +  S P + 
Sbjct: 1292 QPQQLHRSQQQQQQQQQQQQQQQQQQQQQQQQQQHQPPSTQAQLRPSAPLNT--SPPNSW 1349

Query: 320  HSQLE 306
            HS L+
Sbjct: 1350 HSHLK 1354


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = -3

Query: 383 RRPQLEHRGFLRSLQSQPGNRHSQLELRHFLRSLQNQQGNRR 258
           RRP+ ++ GFL ++Q +  + HSQ+ +     +   + G+ R
Sbjct: 115 RRPEEDYEGFLAAVQLE-ASTHSQVVIDGDFNAWHTEWGSAR 155


>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 481 DVVYEADRISRDIGVLNWSIDVVYE 407
           D+  EAD+I +D+  L   ID +YE
Sbjct: 294 DLNREADQIKQDVADLERWIDRIYE 318


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 481 DVVYEADRISRDIGVLNWSIDVVYE 407
           D+  EAD+I +D+  L   ID +YE
Sbjct: 294 DLNREADQIKQDVADLERWIDRIYE 318


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,528
Number of Sequences: 2352
Number of extensions: 12529
Number of successful extensions: 51
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)