BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10c10f
(643 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ441131-4|CAD29633.1| 566|Anopheles gambiae putative apyrase/n... 24 4.7
AJ439398-3|CAD28126.1| 566|Anopheles gambiae putative 5' nucleo... 24 4.7
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 6.2
CR954256-2|CAJ14143.1| 295|Anopheles gambiae cyclin protein. 23 6.2
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 23 6.2
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 23 6.2
Z22930-6|CAA80518.1| 277|Anopheles gambiae trypsin protein. 23 8.2
Z18890-1|CAA79328.1| 277|Anopheles gambiae trypsin protein. 23 8.2
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 23 8.2
>AJ441131-4|CAD29633.1| 566|Anopheles gambiae putative
apyrase/nucleotidase protein.
Length = 566
Score = 23.8 bits (49), Expect = 4.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 610 VGGHPGTYMSTGTIRSHP 557
VGGH T + TGT+ P
Sbjct: 261 VGGHSHTLLHTGTVADWP 278
>AJ439398-3|CAD28126.1| 566|Anopheles gambiae putative 5'
nucleotidase protein.
Length = 566
Score = 23.8 bits (49), Expect = 4.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 610 VGGHPGTYMSTGTIRSHP 557
VGGH T + TGT+ P
Sbjct: 261 VGGHSHTLLHTGTVADWP 278
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 23.4 bits (48), Expect = 6.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 313 ARPKVMGQREPFLPQFNKSSSRATAISAILLAS 215
A +V+ QR + F + S ATA+S I LAS
Sbjct: 100 ATGQVLFQRFFYSKSFVRHSMEATAMSCICLAS 132
>CR954256-2|CAJ14143.1| 295|Anopheles gambiae cyclin protein.
Length = 295
Score = 23.4 bits (48), Expect = 6.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 313 ARPKVMGQREPFLPQFNKSSSRATAISAILLAS 215
A +V+ QR + F + S ATA+S I LAS
Sbjct: 100 ATGQVLFQRFFYSKSFVRHSMEATAMSCICLAS 132
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 23.4 bits (48), Expect = 6.2
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 339 YASSLQRSKLDQRSWAKGNLSSPNSISHQVEPQPS 235
YAS+L S + +++SPNS + + P+ S
Sbjct: 61 YASALSPSSSSASPSSPSSVASPNSRASNMSPESS 95
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 23.4 bits (48), Expect = 6.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 378 LRHIGPYHSEVQQYASSLQRSKLDQRSWAKGNLSSPNSISHQV 250
L + G ++++Q ASS K R A GNLS + I+ +
Sbjct: 87 LANTGSSNTQLQAAASSSSSKKNSSRRNAWGNLSYADLITQAI 129
>Z22930-6|CAA80518.1| 277|Anopheles gambiae trypsin protein.
Length = 277
Score = 23.0 bits (47), Expect = 8.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 450 LEPFCLLKFLLQSLHQTDGEMLGILRHI 367
L+P L L S H T G ++G+LR +
Sbjct: 96 LDPSSLAVRLGSSEHATGGTLVGVLRTV 123
>Z18890-1|CAA79328.1| 277|Anopheles gambiae trypsin protein.
Length = 277
Score = 23.0 bits (47), Expect = 8.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 450 LEPFCLLKFLLQSLHQTDGEMLGILRHI 367
L+P L L S H T G ++G+LR +
Sbjct: 96 LDPSSLAVRLGSSEHATGGTLVGVLRTV 123
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.0 bits (47), Expect = 8.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 408 VMIVAGTLTNKMAPALRKVYDQMPDPRWVI 497
+ IVAG LT++++ + D RWVI
Sbjct: 538 ISIVAGYLTDEVSGLSPFTFMHRDDVRWVI 567
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 710,463
Number of Sequences: 2352
Number of extensions: 15629
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -