Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c09r
         (303 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   0.93 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   2.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   3.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   3.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   3.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   3.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   5.0  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     20   6.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    20   6.6  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    20   6.6  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    20   6.6  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    20   6.6  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    20   6.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           20   6.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    19   8.7  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 0.93
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 24  FITEIT-IYNYVL*FSSRFHDLVVFLLASTGAGFL 125
           +I +IT I NY L   +RF +L  +L   T   ++
Sbjct: 172 YILQITLIVNYALALKNRFKELQKYLKIETSCRYV 206


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
 Frame = +1

Query: 112 VLASCRNKC--TKNRIYNSDNTGLWCIC 189
           VL    NK   T  R++N DN  L+ IC
Sbjct: 331 VLQLMENKIEITACRLFNIDNALLFAIC 358


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -3

Query: 190 CKCTIN--QCCQNC 155
           CK   N  QCC+NC
Sbjct: 788 CKRIYNEKQCCKNC 801


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 90   VFLLASTGAGFLPEQMHEE 146
            +FL+A TG+ F+   +H +
Sbjct: 1006 IFLIAMTGSFFIAACLHPQ 1024


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 90   VFLLASTGAGFLPEQMHEE 146
            +FL+A TG+ F+   +H +
Sbjct: 1006 IFLIAMTGSFFIAACLHPQ 1024


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 90   VFLLASTGAGFLPEQMHEE 146
            +FL+A TG+ F+   +H +
Sbjct: 1006 IFLIAMTGSFFIAACLHPQ 1024


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 90   VFLLASTGAGFLPEQMHEE 146
            +FL+A TG+ F+   +H +
Sbjct: 1006 IFLIAMTGSFFIAACLHPQ 1024


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 184 ICNRLRNLR 210
           ICNR+RN R
Sbjct: 909 ICNRIRNQR 917


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 200 RRRLQMHHKPVLSE 159
           RRR+++ H  VLSE
Sbjct: 261 RRRIEIAHTLVLSE 274


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 200 RRRLQMHHKPVLSE 159
           RRR+++ H  VLSE
Sbjct: 261 RRRIEIAHTLVLSE 274


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/20 (40%), Positives = 8/20 (40%), Gaps = 2/20 (10%)
 Frame = -3

Query: 169 CCQNCKC--DSSCICSGKKP 116
           CC    C  D SC    K P
Sbjct: 110 CCSQDSCHADKSCASDDKSP 129


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 98  AGFHWCWLLAGTNARR 145
           AGF  C+LL G   RR
Sbjct: 85  AGFEDCFLLDGILERR 100


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 98  AGFHWCWLLAGTNARR 145
           AGF  C+LL G   RR
Sbjct: 318 AGFEDCFLLDGILERR 333


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 98  AGFHWCWLLAGTNARR 145
           AGF  C+LL G   RR
Sbjct: 318 AGFEDCFLLDGILERR 333


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 200 RRRLQMHHKPVLSE 159
           RRR+++ H  VLSE
Sbjct: 261 RRRIEIAHTLVLSE 274


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = -3

Query: 202 CGDDCKCT 179
           CG +C CT
Sbjct: 562 CGQNCMCT 569


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,093
Number of Sequences: 336
Number of extensions: 1560
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)