Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10c09f
(349 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.26
SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09) 29 1.0
SB_17959| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_24105| Best HMM Match : Kazal_2 (HMM E-Value=1.6) 28 2.4
SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14) 28 2.4
SB_12005| Best HMM Match : OATP (HMM E-Value=1.1e-15) 28 2.4
SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_32940| Best HMM Match : EGF (HMM E-Value=0) 27 3.2
SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041) 27 3.2
SB_2045| Best HMM Match : EGF (HMM E-Value=0) 27 3.2
SB_42974| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1) 27 4.2
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 27 5.5
SB_19025| Best HMM Match : Keratin_B2 (HMM E-Value=1.3) 27 5.5
SB_19269| Best HMM Match : Pkinase (HMM E-Value=2.4e-38) 27 5.5
SB_16269| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 27 5.5
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 27 5.5
SB_56178| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_47088| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_39610| Best HMM Match : WSC (HMM E-Value=0.003) 26 7.3
SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11) 26 7.3
SB_33652| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_33603| Best HMM Match : PHD (HMM E-Value=0.00046) 26 7.3
SB_21810| Best HMM Match : F5_F8_type_C (HMM E-Value=0.00037) 26 7.3
SB_21594| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_19513| Best HMM Match : UPF0058 (HMM E-Value=5.1) 26 7.3
SB_16910| Best HMM Match : EGF (HMM E-Value=0) 26 7.3
SB_9261| Best HMM Match : Chitin_synth_2 (HMM E-Value=2.7e-07) 26 7.3
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_52848| Best HMM Match : DUF115 (HMM E-Value=8.8) 26 7.3
SB_50242| Best HMM Match : LISCH7 (HMM E-Value=7.5) 26 7.3
SB_50017| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_28657| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_12882| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027) 26 9.7
SB_673| Best HMM Match : VWA (HMM E-Value=8.9e-25) 26 9.7
SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012) 26 9.7
SB_43564| Best HMM Match : zf-C2H2 (HMM E-Value=1.2) 26 9.7
SB_38843| Best HMM Match : Dickkopf_N (HMM E-Value=0.28) 26 9.7
>SB_18560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1937
Score = 31.1 bits (67), Expect = 0.26
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 96 GGCGDDCKCTINQCCQNCKCDSSCICSGKKPA 191
G GD KCT + C+ KCD + C P+
Sbjct: 1229 GYLGDGRKCTADGTCEGVKCDPNAKCIAASPS 1260
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 99 GCGDDCKCTINQCCQNCKCDS-SCICS 176
G G+DCK IN+C QN +CD +C+
Sbjct: 867 GNGEDCK-DINECEQNHECDPLKAVCT 892
>SB_35937| Best HMM Match : LRR_1 (HMM E-Value=7.1e-09)
Length = 224
Score = 29.1 bits (62), Expect = 1.0
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 201 LPLVLASCRNKCTKNRIYNSDNTGLWCICN 112
LP + +SC C K + N D LW N
Sbjct: 187 LPFLFSSCSQYCRKKFVKNKDGLALWLFRN 216
>SB_17959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 843
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 14/48 (29%)
Frame = +3
Query: 93 CGGCGDDCKC-----TINQC---------CQNCKCDSSCICSGKKPAP 194
C CGDDC C TI+ C C C C S C C AP
Sbjct: 586 CPACGDDCDCDRCELTISGCPGQTKGSSVCSLC-CMSECECEENSAAP 632
>SB_24105| Best HMM Match : Kazal_2 (HMM E-Value=1.6)
Length = 361
Score = 27.9 bits (59), Expect = 2.4
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 153 CDSSCICSGKKPAPVEASKKTT 218
C++ C+CS + +PV++ +KTT
Sbjct: 12 CNAGCLCSKAQFSPVKSGEKTT 33
>SB_22953| Best HMM Match : EGF_2 (HMM E-Value=1.3e-14)
Length = 635
Score = 27.9 bits (59), Expect = 2.4
Identities = 9/35 (25%), Positives = 12/35 (34%)
Frame = +3
Query: 84 TMPCGGCGDDCKCTINQCCQNCKCDSSCICSGKKP 188
T C +C C C +C C + C P
Sbjct: 266 TEKCSVVSGECTCIAGSCSSSCPCAGNATCEEAHP 300
>SB_12005| Best HMM Match : OATP (HMM E-Value=1.1e-15)
Length = 448
Score = 27.9 bits (59), Expect = 2.4
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 153 CDSSCICSGKKPAPVEASKKTT 218
C++ C+CS + +PV++ +KTT
Sbjct: 344 CNAGCLCSKAQFSPVKSGEKTT 365
>SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 27.9 bits (59), Expect = 2.4
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +3
Query: 90 PCGGCGDDCKCTINQCCQNCKCDSSCICSGKK 185
P G C N C NC CD C + K+
Sbjct: 36 PSSNTGCFCDLVGNACDPNCCCDEDCTAADKE 67
>SB_32940| Best HMM Match : EGF (HMM E-Value=0)
Length = 1025
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 69 HFKPLTMPCGGCGDDCKCTINQCCQN-CKCDSSC 167
HF T G G DC I+ C N CK +++C
Sbjct: 381 HFYTCTCAPGYEGRDCSRVIDMCVSNPCKLNAAC 414
>SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)
Length = 942
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 75 KPLTMPCGGCGDDCKCTINQCCQNCKCDS-SCICSGK 182
K LTM C D +C NQC C D +C+G+
Sbjct: 410 KCLTMSCKAKNCDQECPGNQCRMACTSDKCRQVCAGR 446
>SB_2045| Best HMM Match : EGF (HMM E-Value=0)
Length = 1101
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +3
Query: 84 TMPCGGCGDDCKCTINQC-CQNCKCDSSCIC 173
T P G G C+ IN+C + KC S C
Sbjct: 898 TCPVGYTGQKCETEINECLSSSVKCTSGSTC 928
>SB_42974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/54 (24%), Positives = 22/54 (40%)
Frame = +3
Query: 84 TMPCGGCGDDCKCTINQCCQNCKCDSSCICSGKKPAPVEASKKTTKS*NRLENY 245
T+P GC +C ++ +SC C P + K + + +ENY
Sbjct: 374 TLPSQGCHGECLSSVKPFAHKSGFATSCSCCA--PIQYKIQKVASSARRHIENY 425
>SB_40561| Best HMM Match : Keratin_B2 (HMM E-Value=1.1)
Length = 1139
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 123 TINQCCQNCKCDSSCICSGKKPAPVEASKKTTKS*NRLENYNT 251
TI NC +S + S K+PAP+ + TT N N +T
Sbjct: 339 TITNHRLNCHTNSVILSSRKRPAPITTTPITTTITNHRLNCHT 381
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 123 TINQCCQNCKCDSSCICSGKKPAPVEASKKTTKS*NRLENYNT 251
TI NC +S + S K+PAP+ + TT N N +T
Sbjct: 425 TITNHRLNCHTNSVILSSRKRPAPITTTPITTTITNHRLNCHT 467
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 123 TINQCCQNCKCDSSCICSGKKPAPVEASKKTTKS*NRLENYNT 251
TI NC +S + S K+PAP+ + TT N N +T
Sbjct: 573 TITNHRLNCHTNSVILSSRKRPAPITTTPITTTITNHRLNCHT 615
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 123 TINQCCQNCKCDSSCICSGKKPAPVEASKKTTKS*NRLENYNT 251
TI NC +S + S K+PAP+ + TT N N +T
Sbjct: 718 TITNHRLNCHTNSVILSSRKRPAPITTTPITTTITNHRLNCHT 760
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 123 TINQCCQNCKCDSSCICSGKKPAPVEASKKTTKS*NRLENYNT 251
TI NC +S + S K+PAP+ + TT N N +T
Sbjct: 777 TITNHRLNCHTNSVILSSRKRPAPITTTPITTTITNHRLNCHT 819
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 123 TINQCCQNCKCDSSCICSGKKPAPVEASKKTTKS*NRLENYNT 251
TI NC +S + S K+PAP+ + TT N N +T
Sbjct: 809 TITNHRLNCHTNSVILSSRKRPAPITTTPITTTITNHRLNCHT 851
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 123 TINQCCQNCKCDSSCICSGKKPAPVEASKKTTKS*NRLENYNT 251
TI NC +S + S K+PAP+ + TT N N +T
Sbjct: 927 TITNHRLNCHTNSVILSSRKRPAPITTTPITTTITNHRLNCHT 969
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 144 NCKCDSSCICSGKKPAPVEASKKTTKS*NRLENYNT 251
NC +S + S K+PAP+ + TT N N +T
Sbjct: 164 NCHTNSVILSSRKRPAPITTTPITTTITNHRLNCHT 199
Score = 26.6 bits (56), Expect = 5.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 123 TINQCCQNCKCDSSCICSGKKPAPVEASKKTTKS*NRLENYNT 251
TI NC S + S K+PAP+ + TT N N +T
Sbjct: 686 TITNHRLNCHTSSVILSSRKRPAPITTTPITTTITNHRLNCHT 728
Score = 26.6 bits (56), Expect = 5.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 123 TINQCCQNCKCDSSCICSGKKPAPVEASKKTTKS*NRLENYNT 251
TI NC S + S K+PAP+ + TT N N +T
Sbjct: 895 TITNHRLNCHTSSVILSSRKRPAPITTTPITTTITNHRLNCHT 937
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 144 NCKCDSSCICSGKKPAPVEASKKTTKS*NRLENYNT 251
NC +S + S K+PAP+ + TT N N +T
Sbjct: 1020 NCHTNSVILSSRKRPAPITTTPITTMITNHRWNCHT 1055
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 123 TINQCCQNCKCDSSCICSGKKPAPVEASKKTT 218
TI NC +S + S K+PAP+ + TT
Sbjct: 189 TITNHRLNCHTNSGILSSRKRPAPITTTPITT 220
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 90 PCGGCGDDCKCTINQC-CQNCKCDSSC 167
P G G +C+ +IN+C Q CK SC
Sbjct: 1054 PLGFAGANCEESINECLSQPCKNGGSC 1080
>SB_19025| Best HMM Match : Keratin_B2 (HMM E-Value=1.3)
Length = 227
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/53 (24%), Positives = 20/53 (37%)
Frame = +3
Query: 93 CGGCGDDCKCTINQCCQNCKCDSSCICSGKKPAPVEASKKTTKS*NRLENYNT 251
C GC +C ++ C Q C I K ++ K + + E Y T
Sbjct: 78 CHGCKMECDRSVGFCSQRCLSGQCTIACAAKRCSLDCRKGECRR-EKTEEYTT 129
>SB_19269| Best HMM Match : Pkinase (HMM E-Value=2.4e-38)
Length = 501
Score = 26.6 bits (56), Expect = 5.5
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 93 CGGCGDDCKCTINQCCQNCKCDS 161
C GC D ++ C +C+CD+
Sbjct: 409 CDGCHVDAMLVMSMRCWSCRCDA 431
>SB_16269| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 196
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 26 QHKTFVI-QHLTKLVSFQTINNAVRRLRRRLQMHHKPVLSEL*MRFFVHLFRQEAS 190
++ TFV+ HLT + SFQ +N+++ +++ + + V + F+ ++ Q S
Sbjct: 136 KYMTFVLGNHLTFIDSFQVMNSSLEKMKGSIHGQLREVQRQAKEDFYSTMYDQHIS 191
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 26.6 bits (56), Expect = 5.5
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 90 PCG--GCGDDCKCTINQCCQNCKCDSSCICS 176
PC CG KC +N CKC S ICS
Sbjct: 1731 PCNLIDCGPYSKCYVNNGVAVCKCPPS-ICS 1760
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +3
Query: 84 TMPCGGCGDDCKCTINQCCQ-NCKCDSSCI 170
T P G G DC I+ C C+ S+CI
Sbjct: 392 TCPTGFSGKDCSVNIDDCADAPCQHGSTCI 421
>SB_56178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 26.2 bits (55), Expect = 7.3
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +3
Query: 69 HFKPLTMPCGGCGDDCKCTINQ--CCQNCKCDSSC 167
++ P P C C C + Q C + C+C+S C
Sbjct: 375 NYIPCDHPGLPCDQSCLCVMTQNFCEKFCQCNSDC 409
>SB_47088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 90 PCGGCGDDCKCTINQCCQNCKCDSS 164
PC CG D C +C +N DS+
Sbjct: 124 PCNDCGRDEVCIDGKCEKNSSSDST 148
>SB_39610| Best HMM Match : WSC (HMM E-Value=0.003)
Length = 264
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 117 KCTINQCCQNCKCDSSCICSGKK 185
K + +C + CK D IC GKK
Sbjct: 234 KSKVCECRKKCKGDKQQICGGKK 256
>SB_37752| Best HMM Match : MFS_1 (HMM E-Value=0.11)
Length = 302
Score = 26.2 bits (55), Expect = 7.3
Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
Frame = +3
Query: 102 CGD-DCKCTINQCCQNC 149
CGD + C N+CC NC
Sbjct: 12 CGDGNSSCQPNKCCDNC 28
>SB_33652| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 26.2 bits (55), Expect = 7.3
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 212 LLAGFHWCWLLAGTNARRIAFTILTTLVY 126
L A F WC L A +AF ILT L +
Sbjct: 29 LYADFIWCGLYALEACAIVAFNILTLLTF 57
>SB_33603| Best HMM Match : PHD (HMM E-Value=0.00046)
Length = 396
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Frame = +3
Query: 78 PLTMPCGGCGDDCKCTINQ-CCQNC 149
P+ PCG CG K CC C
Sbjct: 98 PVKHPCGACGKPTKSNQKAICCDEC 122
>SB_21810| Best HMM Match : F5_F8_type_C (HMM E-Value=0.00037)
Length = 629
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 292 YDTIFITEITIYNYVL*FSSRFHDLVVFLLAS 197
+D I + I ++ F RFH L++FL+AS
Sbjct: 6 HDVISVNHIVSSLKIIKFVIRFHGLLLFLIAS 37
>SB_21594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 90 PCGGCGDDCKCTINQCCQN-CKCDSSC 167
P G GD C+ IN+C N CK +C
Sbjct: 496 PEGFSGDKCEDDINECQSNPCKNGGTC 522
>SB_19513| Best HMM Match : UPF0058 (HMM E-Value=5.1)
Length = 188
Score = 26.2 bits (55), Expect = 7.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 20 VLQHKTFVIQHLTKLVSFQTINNAVRRLRRRLQMHHKPVLS 142
++ KT+ ++ L + S + +N V RLR R H PVLS
Sbjct: 26 IIHAKTYCVEDLAQRGSLVSCSNLVVRLRER---HKCPVLS 63
>SB_16910| Best HMM Match : EGF (HMM E-Value=0)
Length = 1552
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 96 GGCGDDCKCTINQCCQNCKCDSSCI 170
G G +C IN C CK + +CI
Sbjct: 502 GWQGKNCDQNINDCAGQCKHNGTCI 526
>SB_9261| Best HMM Match : Chitin_synth_2 (HMM E-Value=2.7e-07)
Length = 2435
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -3
Query: 215 SLLAGFHWCWLLAGTNARRIAFTI-LTTLVYGAFAIV 108
S AG+H WL ++I F + LT AF IV
Sbjct: 976 STFAGYHLAWLACAMCVQKIGFALPLTLATPFAFVIV 1012
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Frame = +3
Query: 78 PLTMPCGGCGDDCKCTINQ-CCQNC 149
P+ PCG CG K CC C
Sbjct: 98 PVKHPCGACGKPTKSNQKAICCDEC 122
>SB_52848| Best HMM Match : DUF115 (HMM E-Value=8.8)
Length = 152
Score = 26.2 bits (55), Expect = 7.3
Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
Frame = +3
Query: 102 CGDD-CKCTINQCCQNC 149
C DD C+ N CC NC
Sbjct: 72 CADDNTTCSANTCCDNC 88
>SB_50242| Best HMM Match : LISCH7 (HMM E-Value=7.5)
Length = 84
Score = 26.2 bits (55), Expect = 7.3
Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
Frame = +3
Query: 102 CGD-DCKCTINQCCQNC 149
CGD + C N+CC NC
Sbjct: 53 CGDGNSSCQPNKCCDNC 69
>SB_50017| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 857
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 338 QFKCIMFINQITFSIL*YNFHYRDY-NLQLR 249
QF C + ++T+S L FH RD+ Q+R
Sbjct: 73 QFPCDFKLGEVTYSHLGSKFHTRDFIKFQIR 103
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/39 (28%), Positives = 15/39 (38%)
Frame = +3
Query: 93 CGGCGDDCKCTINQCCQNCKCDSSCICSGKKPAPVEASK 209
C C C+ N KC + CSG+ P +K
Sbjct: 1977 CNDCSPGFYCSPPTIYPNLKCSAGHWCSGRSTEPSPVNK 2015
>SB_28657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3296
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 237 LVDFMIW*SSCWLPLVLASCRNKCTK 160
+VD M+W CW VL R TK
Sbjct: 2881 IVDQMVWFRECWHEEVLRQLRQGLTK 2906
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +3
Query: 96 GGCGDDCKCTINQCCQNCKCDSSCIC 173
G G C+ I++C + CDS +C
Sbjct: 3607 GLIGKQCEIDIDECKNSSTCDSGKVC 3632
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +3
Query: 102 CGDDCKCTINQCCQNCKCDSSCICSGKKPAP 194
C + C + C N +C+C+G K P
Sbjct: 3620 CKNSSTCDSGKVCINTYGSHACVCNGDKYGP 3650
>SB_12882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Frame = +3
Query: 81 LTMPCGGCGD-----DCK-CTINQCCQNCKCDSSCIC 173
+T+ C C D C+ C ++ C++C SC+C
Sbjct: 14 VTVSCLSCRDCVVSLSCRGCVVSLSCRDCVVSVSCLC 50
>SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027)
Length = 442
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 114 CKCTINQCCQNCKCDSSCIC 173
C+ C QNC SCIC
Sbjct: 358 CEVISGGCSQNCHTKRSCIC 377
>SB_673| Best HMM Match : VWA (HMM E-Value=8.9e-25)
Length = 257
Score = 25.8 bits (54), Expect = 9.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 105 GDDCKCTINQCCQNCKCDSSCIC 173
GD+C +N+C N C + +C
Sbjct: 213 GDNCNYNVNECLDN-PCKNGAVC 234
>SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012)
Length = 489
Score = 25.8 bits (54), Expect = 9.7
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +3
Query: 114 CKCTINQCCQNCKCDSSCIC 173
C+ C QNC SCIC
Sbjct: 358 CEVISGGCSQNCHTKRSCIC 377
>SB_43564| Best HMM Match : zf-C2H2 (HMM E-Value=1.2)
Length = 474
Score = 25.8 bits (54), Expect = 9.7
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 93 CGGCGDDCKCTINQCCQNCKCDSSCI 170
C GC C T +Q C NC+ SC+
Sbjct: 93 CFGC--KCHHTHDQLCDNCETLKSCL 116
>SB_38843| Best HMM Match : Dickkopf_N (HMM E-Value=0.28)
Length = 241
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 102 CGDDCKCTINQCCQNCKCDSSC 167
CG KC N C CD SC
Sbjct: 32 CGLAKKCCENVCLARLSCDGSC 53
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,287,594
Number of Sequences: 59808
Number of extensions: 196887
Number of successful extensions: 996
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 523129866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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