Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c08r
         (498 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB018263-1|BAA34440.2| 1091|Homo sapiens KIAA0720 protein protein.     32   1.3  
AK125693-1|BAC86247.1|  321|Homo sapiens protein ( Homo sapiens ...    31   2.2  
AB051472-1|BAB21776.2| 1505|Homo sapiens KIAA1685 protein protein.     30   3.9  
U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein.                30   5.1  
AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein.        30   5.1  
AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein.             30   5.1  

>AB018263-1|BAA34440.2| 1091|Homo sapiens KIAA0720 protein protein.
          Length = 1091

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = -3

Query: 229 GRPSPGSRGVPVRDRPPCRGRGRFNFRHSPVQKLGTKRISLQCTNLGTLRLIC 71
           G P PG  G P R  PP R         SP +K G +  +  C + G    +C
Sbjct: 6   GLPVPGVPGAPARRPPPARHGACSMDDQSPAEKKGLRCQNPACMDKGRAAKVC 58


>AK125693-1|BAC86247.1|  321|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43705 fis, clone TESOP2001818. ).
          Length = 321

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3

Query: 277 AGCQREVHGARR*TRQGRPSPGSRGVPVRDRPPCRGRGR 161
           AGC+ +  G R  T +GR SP + GVP R   P   R R
Sbjct: 133 AGCRTQARGQRL-TSRGRESPEATGVPERRGDPETRRNR 170


>AB051472-1|BAB21776.2| 1505|Homo sapiens KIAA1685 protein protein.
          Length = 1505

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 229 GRPSPGSRGVPVRDRPPCRGRGR 161
           GRP PG   +PV  RP  R +GR
Sbjct: 54  GRPEPGHGSLPVSSRPDMREKGR 76


>U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein.
          Length = 3321

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 175  DKADGRELGHPYFPGSDGPDASTGGRRVP 261
            +K+DG   G    PGS GP+A T G   P
Sbjct: 2329 EKSDGSGFGARLSPGSGGPEAQTAGPVTP 2357


>AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein.
          Length = 3336

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 175  DKADGRELGHPYFPGSDGPDASTGGRRVP 261
            +K+DG   G    PGS GP+A T G   P
Sbjct: 2340 EKSDGSGFGARLSPGSGGPEAQTAGPVTP 2368


>AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein.
          Length = 3284

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 175  DKADGRELGHPYFPGSDGPDASTGGRRVP 261
            +K+DG   G    PGS GP+A T G   P
Sbjct: 2367 EKSDGSGFGARLSPGSGGPEAQTAGPVTP 2395


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,752,507
Number of Sequences: 237096
Number of extensions: 1206736
Number of successful extensions: 8220
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8187
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)