Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10c07r
(343 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847... 72 1e-13
08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369... 71 3e-13
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86... 62 8e-11
03_06_0582 - 34891613-34891795,34892407-34892466,34893134-348932... 45 1e-05
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468... 42 1e-04
01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841 28 1.7
05_02_0150 - 7111090-7111225,7111251-7111458,7111705-7111774,711... 27 2.9
03_01_0463 + 3551764-3551897,3551989-3552046,3552148-3552255,355... 27 2.9
01_04_0143 + 16689471-16689498,16689687-16689818,16689974-166900... 27 2.9
07_01_0751 - 5777017-5778032,5779718-5780111,5780830-5781936 27 3.9
03_05_0440 + 24322332-24322388,24323478-24323615,24323654-243237... 27 3.9
11_06_0715 + 26552962-26553510,26553578-26555746 27 5.1
08_02_0818 - 21524539-21524664,21524911-21524961,21525800-215261... 27 5.1
01_01_0978 + 7738232-7740848,7740929-7741320 27 5.1
11_04_0348 - 16632102-16632188,16632326-16632391,16632487-166325... 26 6.7
07_03_0191 - 14920321-14920511,14920844-14921177 26 6.7
04_01_0396 + 5191653-5191874,5192281-5192396,5192891-5193455 26 6.7
04_01_0081 - 890347-890603,890871-891204 26 6.7
03_06_0051 + 31290431-31290610,31290727-31290849,31291771-312919... 26 6.7
02_05_0753 + 31510269-31510473,31510989-31511035,31511123-315111... 26 6.7
02_01_0365 + 2621302-2621711,2622442-2622620,2623381-2623496,262... 26 6.7
11_06_0368 + 22756988-22758205 26 8.9
10_08_0931 - 21647562-21649037 26 8.9
09_03_0179 - 13131404-13131514,13131834-13131920,13132316-131324... 26 8.9
01_06_1208 + 35424241-35424370,35424415-35424728,35424782-354249... 26 8.9
>03_05_0107 -
20883353-20883627,20883739-20883801,20884608-20884725,
20885012-20885023
Length = 155
Score = 71.7 bits (168), Expect = 1e-13
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = -2
Query: 279 MSLXEQFKQVADKVRXWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLV--ESAKWKAW 106
M L E F++ A+KV+ S+++ L LY LYKQAT+GDVN ++P + AKW AW
Sbjct: 1 MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVNTSRPGIFAQRDRAKWDAW 60
Query: 105 NGRKGISQDDAKKQYIENAEKLHSKYA 25
+G S+++A YI ++L + A
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQLQEEAA 87
>08_01_0417 -
3692247-3692329,3692442-3692504,3693233-3693350,
3694084-3694095
Length = 91
Score = 70.5 bits (165), Expect = 3e-13
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = -2
Query: 279 MSLXEQFKQVADKVRXWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLV--ESAKWKAW 106
M L E F+Q A+K + S++ L LY LYKQAT+GDVN A+P + AKW AW
Sbjct: 1 MGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTARPGIFAQRDRAKWDAW 60
Query: 105 NGRKGISQDDAKKQYIENAEKL 40
+G S+++A YI ++L
Sbjct: 61 KAVEGKSKEEAMSDYITKVKQL 82
>06_01_0108 -
860080-860162,860276-860338,860857-860974,861481-861492
Length = 91
Score = 62.5 bits (145), Expect = 8e-11
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = -2
Query: 279 MSLXEQFKQVADKVRXWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAW 106
M L E+F++ A+K + S+++ L LY LYKQAT+G V +P L + KW AW
Sbjct: 1 MGLQEEFEEFAEKAKTLPDTISNEDKLLLYGLYKQATVGPVTTGRPGIFNLKDRYKWDAW 60
Query: 105 NGRKGISQDDAKKQYIENAEKL 40
+G S+++A YI ++L
Sbjct: 61 KAVEGKSKEEAMADYITKVKQL 82
>03_06_0582 -
34891613-34891795,34892407-34892466,34893134-34893280,
34893502-34893657,34893745-34893828,34893907-34893995,
34894575-34894689,34894776-34894899,34895080-34895219,
34895868-34895929,34896042-34896108,34896185-34896295,
34896868-34896945,34897074-34897274,34897492-34897563,
34897630-34897693,34898084-34898154,34898328-34898474
Length = 656
Score = 45.2 bits (102), Expect = 1e-05
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = -2
Query: 213 DDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDAKKQYIENAEK 43
+D L LY LY+QAT+G N+ +P VE +KW +W+G + +A + +++ E+
Sbjct: 37 NDVALLLYGLYQQATVGPCNVPKPRAWNPVEQSKWTSWHGLGSMPSAEAMRLFVKILEE 95
>04_04_1623 -
34846056-34846223,34846547-34846644,34846738-34846829,
34847096-34847202,34847385-34847490,34848108-34848547
Length = 336
Score = 41.9 bits (94), Expect = 1e-04
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -2
Query: 225 TKPSDDENLALYSLYKQATIGDVNIAQPSG--LVESAKWKAWNGRKGISQDDAKKQYIEN 52
T + L LY LYK AT G QPS L AKW AW+ + ++A ++YI
Sbjct: 109 TSVPEQAQLQLYGLYKIATEGPCTAPQPSALKLKARAKWNAWHKLGAMPTEEAMQKYITV 168
Query: 51 AEKLHSKYA 25
++L ++
Sbjct: 169 VDELFPNWS 177
>01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841
Length = 534
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +2
Query: 95 LRPFHAFHLALSTRPLGWAMLTSPMVACLYREYSARFSSSLGLVFQXLTLSATCLNCSXR 274
LR + +A+ R L + + SP++ CL YS R L L L C+ C
Sbjct: 230 LRELGLYCVAMEDRDLDFVLANSPVLECLGIYYSQRQIVLLRLASHSLRCVQICM-CIAE 288
Query: 275 DI 280
DI
Sbjct: 289 DI 290
>05_02_0150 -
7111090-7111225,7111251-7111458,7111705-7111774,
7112290-7112367
Length = 163
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -3
Query: 161 MLTLPSPAVLWRAPSGRHGTVAKASPKTMPRSNTSKMRRNSTPNTH 24
M+ SP W AP G G +A+ P+ S NTH
Sbjct: 35 MVINSSPKHTWFAPVGNKGALARIQPQVTELEGKVTSLSTSMENTH 80
>03_01_0463 +
3551764-3551897,3551989-3552046,3552148-3552255,
3552664-3552721,3552788-3553014,3553085-3553145,
3553311-3553615
Length = 316
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/93 (20%), Positives = 38/93 (40%)
Frame = -2
Query: 312 TLXPDLKR*HKMSLXEQFKQVADKVRXWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL 133
T+ PD + E + A++ + KP+ + +SLY AT ++ +
Sbjct: 189 TVFPDAEARLSQPKDETWSDCAEQ--GFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPV 246
Query: 132 VESAKWKAWNGRKGISQDDAKKQYIENAEKLHS 34
++ KW A S D+ ++ + E H+
Sbjct: 247 IQGEKWSATKWIHVRSYDENGRRSSDKCEDQHA 279
>01_04_0143 +
16689471-16689498,16689687-16689818,16689974-16690013,
16690214-16690280,16690349-16690431,16690755-16690821,
16692741-16692821,16693696-16693791,16694172-16694198
Length = 206
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -2
Query: 261 FKQVADKVRXWKTKPSDDENLALYSLYKQATIGDVNIAQ 145
F+ D + WK S ++NLA +++Y T V++ Q
Sbjct: 129 FQDYVDLI-IWKVSRSSEQNLAFFAVYNMETTDIVSLYQ 166
>07_01_0751 - 5777017-5778032,5779718-5780111,5780830-5781936
Length = 838
Score = 27.1 bits (57), Expect = 3.9
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 16 NNLCVFGVEFLRIFDVLLLGIVLGDAFATVP-CLPLGALHKTAGLGNVNITYGSLLVQGV 192
NN C F + L++F L L +FA C LG +T L +V G+ L G
Sbjct: 76 NNYCKFDDQRLQLFTSSLYLAALAASFAASRLCTRLGR-RRTMQLASVFFLGGTALCAGA 134
Query: 193 QRKVLIVTG 219
+++ G
Sbjct: 135 ANLAMLIVG 143
>03_05_0440 +
24322332-24322388,24323478-24323615,24323654-24323736,
24325038-24325128,24326091-24326189,24326356-24326418,
24327182-24327259,24329354-24329543,24329812-24330065,
24330159-24330531,24331193-24331276,24332085-24332371,
24332495-24332542,24333194-24333220,24333951-24333987,
24334063-24334250,24334343-24334521,24334595-24334877,
24335481-24335717,24335798-24335988,24336552-24336561,
24336844-24336984,24337073-24337288,24338437-24338727,
24338852-24339025
Length = 1272
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -2
Query: 210 DENLALYSLYKQATIGDVNIAQPSGLVES 124
DE+ AL +L+ A + VNI QPS +VES
Sbjct: 476 DESSALDALHTLADLS-VNILQPSSIVES 503
>11_06_0715 + 26552962-26553510,26553578-26555746
Length = 905
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Frame = +1
Query: 178 LVQGVQRKVLIVTGLGLPX---PNLIGDLFEL 264
LV G R + ++ +GLP PN+IGDLF L
Sbjct: 560 LVAGKCRYMSVLELIGLPKDNIPNVIGDLFNL 591
>08_02_0818 -
21524539-21524664,21524911-21524961,21525800-21526170,
21526497-21526852,21527926-21527996
Length = 324
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = -2
Query: 252 VADKVRXWKTKP----SDDENLALYSLYKQAT 169
V D++ W P +D+EN + +LYK+AT
Sbjct: 241 VKDRIEEWYRPPWDRTADEENASFNALYKEAT 272
>01_01_0978 + 7738232-7740848,7740929-7741320
Length = 1002
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = -2
Query: 240 VRXWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVE-SAKWK-AWNGRKGIS 85
V+ W + +D L +Y ++GDV + +GL++ S ++K A + +G+S
Sbjct: 758 VKLWCSCTHNDTKLLVYEYMPNGSLGDVLHSSKAGLLDWSTRYKIALDAAEGLS 811
>11_04_0348 -
16632102-16632188,16632326-16632391,16632487-16632571,
16632951-16633044,16633417-16633474,16633767-16633807,
16633919-16634018
Length = 176
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = -2
Query: 168 IGDVNIAQPSGLVESAKWKAWNGRKGISQDDAKKQYIENAEKLHSKY 28
+G VN+ + K+ + ++ ++ D+A+ IE AEK+H+++
Sbjct: 75 LGKVNVMYEDDMELMVKFYQFVAKEEMAIDEAELDPIEFAEKIHAQH 121
>07_03_0191 - 14920321-14920511,14920844-14921177
Length = 174
Score = 26.2 bits (55), Expect = 6.7
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Frame = -3
Query: 152 LPSPA-VLWRAP---SGRHGTVAKASPKTMPRSNTSKMRRNSTP 33
L PA V WR P SGRH T A P + T +R P
Sbjct: 46 LSDPAQVWWRCPLPASGRHATTVAALAALSPDTMTHPLRLRPLP 89
>04_01_0396 + 5191653-5191874,5192281-5192396,5192891-5193455
Length = 300
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -3
Query: 338 TVPIGTLQLPYXLISKDNT-KCLSXSNSNRSPIRLGXGRPSP 216
++ L + + +IS NT K L+ S+ SP +LG G P P
Sbjct: 114 SISASLLGIIFLIISLRNTNKGLTSLQSSSSPTKLGDGLPLP 155
>04_01_0081 - 890347-890603,890871-891204
Length = 196
Score = 26.2 bits (55), Expect = 6.7
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Frame = -3
Query: 152 LPSPA-VLWRAP---SGRHGTVAKASPKTMPRSNTSKMRRNSTP 33
L PA V WR P SGRH T A P + T +R P
Sbjct: 46 LSDPAQVWWRCPLPASGRHATTVAALAALSPDTMTHPLRLRPLP 89
>03_06_0051 +
31290431-31290610,31290727-31290849,31291771-31291928,
31292395-31292497,31293077-31293172,31293367-31293432,
31293500-31293619,31293905-31293991
Length = 310
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -2
Query: 228 KTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 109
K KP + L YSL TI ++ +++ KW A
Sbjct: 260 KVKPRKGDGLLFYSLMVNGTIDPTSLHGSCPVIKGEKWVA 299
>02_05_0753 +
31510269-31510473,31510989-31511035,31511123-31511177,
31511282-31511354,31511441-31511528,31511658-31511740,
31511841-31511970,31512183-31512261,31512409-31512473,
31512581-31512682
Length = 308
Score = 26.2 bits (55), Expect = 6.7
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2
Query: 216 SDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKAWNGRKGISQDDAKK 67
SD ALY +A IG + +A+P+ + ++A W G K ++ AKK
Sbjct: 19 SDRRRSALYGGEGRARIGSLRVAEPA-VAKAAVWA--RGSKPVAPLRAKK 65
>02_01_0365 +
2621302-2621711,2622442-2622620,2623381-2623496,
2623626-2623964,2624113-2624307,2624505-2624594,
2625288-2625518,2625632-2625952
Length = 626
Score = 26.2 bits (55), Expect = 6.7
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -2
Query: 237 RXWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKAWNGRKGISQDDAK-KQY 61
R K K +DE+ + + K+A + I Q L+++ WNG S++ K ++
Sbjct: 90 RKHKQKRKNDESDEVSRMEKRARYLLIKIKQEQNLLDAYSGDGWNGH---SREKIKPEKE 146
Query: 60 IENAEKLHSKY 28
++ A+K KY
Sbjct: 147 LQRAKKQIMKY 157
>11_06_0368 + 22756988-22758205
Length = 405
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -1
Query: 136 SCGERQVEGMERSQRHLPRRCQEAIHRKCGETPLQIRIN 20
SC E + L RC+ A HR C +T L+ +N
Sbjct: 221 SCAVCLTEFRDGETLRLLPRCRHAFHRGCIDTWLRAHVN 259
>10_08_0931 - 21647562-21649037
Length = 491
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 152 LPSPAVLWRAPSGRHGTVAKASPKTMPR 69
LPSP + WR+ SGR A + P P+
Sbjct: 214 LPSP-IPWRSRSGRFDASAPSPPSPSPK 240
>09_03_0179 -
13131404-13131514,13131834-13131920,13132316-13132448,
13133079-13133319,13133423-13133540,13133546-13133731,
13133864-13134049,13134443-13134652,13135171-13135347,
13135823-13135964,13136385-13136927,13137565-13138022
Length = 863
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 110 HGTVAKASPKTMPRSNTSKMRRNS 39
HGT A K MP NTS+ NS
Sbjct: 413 HGTSDAAGSKKMPTGNTSQNMTNS 436
>01_06_1208 +
35424241-35424370,35424415-35424728,35424782-35424967,
35425361-35425523,35425601-35425787,35425875-35426016
Length = 373
Score = 25.8 bits (54), Expect = 8.9
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = -3
Query: 266 SNSNRSPIRLGXGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAPSGRHGTVAKAS 87
+ S+RSP+ T +RL + L PA + A G HG AS
Sbjct: 52 AGSSRSPVFSSLVEDDGETRHLQALDGADTRLRLFQMDLLDPASITPAVDGAHGVFHLAS 111
Query: 86 PKTM 75
P T+
Sbjct: 112 PLTL 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,428,939
Number of Sequences: 37544
Number of extensions: 226275
Number of successful extensions: 767
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -