Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10c07f
(399 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identic... 61 2e-10
At3g05420.2 68416.m00594 acyl-CoA binding family protein similar... 47 4e-06
At3g05420.1 68416.m00593 acyl-CoA binding family protein similar... 47 4e-06
At5g27630.1 68418.m03310 acyl-CoA binding family protein similar... 47 5e-06
At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / AC... 42 2e-04
At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2) iden... 40 5e-04
At4g24230.2 68417.m03478 acyl-CoA binding protein, putative / AC... 40 8e-04
At4g24230.1 68417.m03477 acyl-CoA binding protein, putative / AC... 40 8e-04
At5g55770.1 68418.m06951 DC1 domain-containing protein contains ... 31 0.21
At4g03170.1 68417.m00433 hypothetical protein 31 0.28
At1g51355.1 68414.m05776 expressed protein 31 0.28
At1g33250.1 68414.m04110 fringe-related protein + weak similarit... 29 1.1
At1g78370.1 68414.m09133 glutathione S-transferase, putative sim... 29 1.5
At1g55560.1 68414.m06359 multi-copper oxidase type I family prot... 29 1.5
At1g20600.1 68414.m02573 DNA-binding protein-related low similar... 29 1.5
At5g35604.1 68418.m04242 hypothetical protein 28 2.0
At5g06850.1 68418.m00774 C2 domain-containing protein contains I... 28 2.0
At3g09810.1 68416.m01169 isocitrate dehydrogenase, putative / NA... 28 2.0
At4g00300.1 68417.m00037 fringe-related protein + weak similarit... 27 3.5
At3g26750.1 68416.m03346 expressed protein 27 3.5
At1g53680.1 68414.m06108 glutathione S-transferase, putative sim... 27 3.5
At3g13400.1 68416.m01685 multi-copper oxidase type I family prot... 27 4.6
At1g32850.1 68414.m04048 ubiquitin carboxyl-terminal hydrolase f... 27 4.6
At3g13390.1 68416.m01684 multi-copper oxidase type I family prot... 27 6.1
At1g16370.1 68414.m01958 transporter-related low similarity to o... 27 6.1
At3g61740.1 68416.m06923 PHD finger family protein (ATX3) contai... 26 8.0
At1g55570.1 68414.m06360 multi-copper oxidase type I family prot... 26 8.0
>At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identical
to acyl-CoA-binding protein (ACBP) [Arabidopsis
thaliana] SWISS-PROT:P57752
Length = 92
Score = 61.3 bits (142), Expect = 2e-10
Identities = 31/82 (37%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +2
Query: 65 MSLDEQFXQVADKVRNWKTKPSDDENLALXSLYKQATIGDVNIAQPS--GLVESAKWKAW 238
M L E+F + A+KV PS+++ L L LYKQA G V+ ++P + E AKW AW
Sbjct: 1 MGLKEEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVDTSRPGMFSMKERAKWDAW 60
Query: 239 NGRKGISQDDAKKQYIENAEKL 304
+G S ++A YI ++L
Sbjct: 61 KAVEGKSSEEAMNDYITKVKQL 82
>At3g05420.2 68416.m00594 acyl-CoA binding family protein similar to
PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium
discoideum); contains Pfam profiles PF00887: Acyl CoA
binding protein, PF01344: Kelch motif
Length = 669
Score = 47.2 bits (107), Expect = 4e-06
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +2
Query: 107 RNWKTKPSDDENLALXSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDAKKQ 280
+N +K DD L L +LY+QAT+G N +PS VE +KWK+W G + +A +
Sbjct: 33 KNVISKFPDDTALLLYALYQQATVGPCNTPKPSAWRPVEQSKWKSWQGLGTMPSIEAMRL 92
Query: 281 YIENAEK 301
+++ E+
Sbjct: 93 FVKILEE 99
>At3g05420.1 68416.m00593 acyl-CoA binding family protein similar to
PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium
discoideum); contains Pfam profiles PF00887: Acyl CoA
binding protein, PF01344: Kelch motif
Length = 668
Score = 47.2 bits (107), Expect = 4e-06
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +2
Query: 107 RNWKTKPSDDENLALXSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDAKKQ 280
+N +K DD L L +LY+QAT+G N +PS VE +KWK+W G + +A +
Sbjct: 33 KNVISKFPDDTALLLYALYQQATVGPCNTPKPSAWRPVEQSKWKSWQGLGTMPSIEAMRL 92
Query: 281 YIENAEK 301
+++ E+
Sbjct: 93 FVKILEE 99
>At5g27630.1 68418.m03310 acyl-CoA binding family protein similar to
RING finger rngB protein, cytosolic - Dictyostelium
discoideum, PIR:S68824; contains Pfam profiles PF01344:
Kelch motif, PF00887: Acyl CoA binding protein (ACBP)
Length = 648
Score = 46.8 bits (106), Expect = 5e-06
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Frame = +2
Query: 104 VRNWKTKPSDDENLALXSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDAKK 277
V+ +K S+D +L L +L++QAT+G +I +PS VE +KWK+W G + +A +
Sbjct: 33 VKQLSSKFSNDTSLLLYTLHQQATLGPCSIPKPSAWNPVEQSKWKSWQGLGTMPSIEAMR 92
Query: 278 QYIENAEK 301
+++ E+
Sbjct: 93 LFVKILEE 100
>At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / ACBP,
putative similar to acyl-CoA binding protein 2
[Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 338
Score = 41.5 bits (93), Expect = 2e-04
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 122 KPSDDENLALXSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDAKKQYIENA 295
K S++ L L LYK AT G QPS L AKW+AW + ++A ++YI+
Sbjct: 116 KVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIDLV 175
Query: 296 EKLH 307
+L+
Sbjct: 176 TQLY 179
>At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2)
identical to acyl-CoA binding protein 2 [Arabidopsis
thaliana] gi|12039034|gb|AAG46057
Length = 354
Score = 40.3 bits (90), Expect = 5e-04
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 125 PSDDENLALXSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDAKKQYIENAE 298
PSD + L LYK AT G QPS L AKW+AW + ++A ++YIE
Sbjct: 128 PSDVQQ-QLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIEIVT 186
Query: 299 KLH 307
+L+
Sbjct: 187 QLY 189
>At4g24230.2 68417.m03478 acyl-CoA binding protein, putative / ACBP,
putative contains similarity to acyl-CoA binding protein
2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 362
Score = 39.5 bits (88), Expect = 8e-04
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 134 DENLALXSLYKQATIGDVNIAQPSGLVESA--KWKAWNGRKGISQDDAKKQYIENAEK 301
+ + L L+K AT G AQP ++ SA KW AW +SQ++A +QY+ K
Sbjct: 254 EAKMELFGLHKIATEGSCREAQPMAVMISARAKWNAWQKLGNMSQEEAMEQYLALVSK 311
>At4g24230.1 68417.m03477 acyl-CoA binding protein, putative / ACBP,
putative contains similarity to acyl-CoA binding protein
2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 364
Score = 39.5 bits (88), Expect = 8e-04
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 134 DENLALXSLYKQATIGDVNIAQPSGLVESA--KWKAWNGRKGISQDDAKKQYIENAEK 301
+ + L L+K AT G AQP ++ SA KW AW +SQ++A +QY+ K
Sbjct: 254 EAKMELFGLHKIATEGSCREAQPMAVMISARAKWNAWQKLGNMSQEEAMEQYLALVSK 311
>At5g55770.1 68418.m06951 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 695
Score = 31.5 bits (68), Expect = 0.21
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 211 CGERQVEGMERSQRHLPRRCQEAIHRKCGETPLQIR 318
CG + + ++ S+ + +CQ HR+C E+PL+I+
Sbjct: 156 CGACKGKMLDTSKDYACLQCQRKFHRECVESPLEIK 191
>At4g03170.1 68417.m00433 hypothetical protein
Length = 250
Score = 31.1 bits (67), Expect = 0.28
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 182 DVNIAQPSGLVESAKWKAWNGRKGISQDDAKKQYIEN 292
DV++ P G V+ ++K WNG K KQ++E+
Sbjct: 178 DVSVYGPDGKVQQMEFKMWNGDKTPVLTSGWKQFVED 214
>At1g51355.1 68414.m05776 expressed protein
Length = 116
Score = 31.1 bits (67), Expect = 0.28
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 57 NTKCLSTSNSXRSPIRLGTGRPSPVTMRTLRXTPCTSRLP*VMLTLPSP 203
N+ STS++ SP T PSPV+ + TP SR+P ++ P+P
Sbjct: 32 NSDVTSTSSTSTSPT--STATPSPVSAESGCCTPEKSRIPEMLTCPPAP 78
>At1g33250.1 68414.m04110 fringe-related protein + weak similarity
to Fringe [Schistocerca gregaria](GI:6573138);Fringe
encodes an extracellular protein that regulates Notch
signalling.
Length = 548
Score = 29.1 bits (62), Expect = 1.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 275 SWHRLGRCLCDRSMPSTWRSPQDRWAGQC 189
+WH R LC R+ P+T P GQC
Sbjct: 508 NWHLAPRRLCCRATPTTTNEPLRLTVGQC 536
>At1g78370.1 68414.m09133 glutathione S-transferase, putative
similar to 2,4-D inducible glutathione S-transferase
GI:2920666 from [Glycine max]
Length = 217
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 221 AKWKAWNGRKGISQDDAKKQYIENAEKLHSK 313
A++K W G+KG Q+ KK++IE + L S+
Sbjct: 109 AQFKVW-GKKGEEQEAGKKEFIEAVKILESE 138
>At1g55560.1 68414.m06359 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 549
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 187 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 101
N+TYG+ GV +KV+++ G P PNL
Sbjct: 31 NVTYGTASPLGVPQKVILING-QFPGPNL 58
>At1g20600.1 68414.m02573 DNA-binding protein-related low similarity
to RAV2 [Arabidopsis thaliana] GI:3868859
Length = 237
Score = 28.7 bits (61), Expect = 1.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 182 DVNIAQPSGLVESAKWKAWNGRK 250
DV++ P G V+ K+K WNG K
Sbjct: 167 DVSVYGPDGEVQQMKFKMWNGDK 189
>At5g35604.1 68418.m04242 hypothetical protein
Length = 298
Score = 28.3 bits (60), Expect = 2.0
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = +3
Query: 90 RSPIRLGTGRPSPVTMRTLRXTPCTSRLP*VMLTLPSPAVLWRAPSGRHGTVAKASPKTM 269
RSP R G SP + T C+ RL T+ P + +PS + + K T+
Sbjct: 69 RSPRRPSRGNSSPRRDKARARTDCSPRLSPPSRTMGPPPPVATSPSSQ-WSGEKTDHNTV 127
Query: 270 PRSNTSKMRRNSTPNTHKLLL 332
P+ + R TP K++L
Sbjct: 128 PQKEGGEHR--DTPPRSKVVL 146
>At5g06850.1 68418.m00774 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 669
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -1
Query: 327 IIYAYLEWSFSAFSMYCFLASSWEMPLRPFHAFHLALSTRPLGWAMLTSP 178
I+ Y E +Y FL W RP H H + T+ + WA SP
Sbjct: 505 ILICYPELILPTTFLYMFLIGLWNFRFRPRHPAH--MDTK-VSWAEAASP 551
>At3g09810.1 68416.m01169 isocitrate dehydrogenase, putative / NAD+
isocitrate dehydrogenase, putative strong similarity to
isocitrate dehydrogenase (NAD+) GB:CAA65502 GI:3021506
[Nicotiana tabacum]
Length = 374
Score = 28.3 bits (60), Expect = 2.0
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = -3
Query: 349 EIYL--ILSNNLCVFGVEFLRIFDVLLLGIVLGDAFATVPCLPLGALHKTAGLGNVNITY 176
EIY ++ +N C+ V+ +FDVL++ + GD + + +G L T + N+
Sbjct: 236 EIYYEKVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSM-NIG-ED 293
Query: 175 GSLLVQGVQRKVLIVTGLGLPVPNLIGDLXELLVERHFVLSXE 47
G L + V + G+ L P + L +++ RH L+ +
Sbjct: 294 GIALAEAVHGSAPDIAGMNLANPTAL-LLSGVMMLRHLKLNKQ 335
>At4g00300.1 68417.m00037 fringe-related protein + weak similarity
to Fringe [Schistocerca gregaria](GI:6573138);Fringe
encodes an extracellular protein that regulates Notch
signalling.
Length = 785
Score = 27.5 bits (58), Expect = 3.5
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Frame = -1
Query: 312 LEWSFSAFSMYCFL-ASSWEMPLRPFHAFHL-------ALSTRPLGWAMLTSPMVACLYR 157
+ W ++ ++ A E+P R F+ +HL A +TRP+ W P V
Sbjct: 356 ISWGYTVQITRTYMPARMMEVPTRTFNDWHLRSDFTNLAFNTRPVTWTDCQRPRVFYFSH 415
Query: 156 EXSARFSSSLGLVFQFL 106
S SS + Q+L
Sbjct: 416 AFSNSSSSDTTTISQYL 432
>At3g26750.1 68416.m03346 expressed protein
Length = 526
Score = 27.5 bits (58), Expect = 3.5
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -2
Query: 293 HFRCIASWHRLGRC-LCDRS-MPS-TWRSPQDRWAGQC 189
HF C + +RL + L D S MPS WR D W G C
Sbjct: 156 HFYCRSCSNRLTKKELLDFSEMPSINWRESADNWFGTC 193
>At1g53680.1 68414.m06108 glutathione S-transferase, putative
similar to GI:2853219 from [Carica papaya]
Length = 224
Score = 27.5 bits (58), Expect = 3.5
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +2
Query: 230 KAWNGRKGISQDDAKKQYIENAEKLHSK 313
K W +KG Q+ KK+++E+ + L ++
Sbjct: 116 KIWGNKKGEEQEKGKKEFLESLKVLEAE 143
>At3g13400.1 68416.m01685 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 187 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 101
N+TYG+ G+ ++V+++ G P PNL
Sbjct: 32 NVTYGTAAPLGIPQQVILING-QFPGPNL 59
>At1g32850.1 68414.m04048 ubiquitin carboxyl-terminal hydrolase
family protein similar to ubiquitin-specific protease
UBP5 [Arabidopsis thaliana] GI:6648604; contains Pfam
profile PF00443: Ubiquitin carboxyl-terminal hydrolase
Length = 892
Score = 27.1 bits (57), Expect = 4.6
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +2
Query: 128 SDDENLALXSLYKQATIGDV--NIAQPSGLV-ESAK-WKAWNGRKGISQDDAKKQYIENA 295
S DE+ + L KQA+IG + + G+ E A+ W + +K + D + +Q +E A
Sbjct: 155 SRDESTTIIRLSKQASIGQLYEMVCAGKGVAKEKARIWDYFEKKKSVLLDPSSEQSVEEA 214
>At3g13390.1 68416.m01684 multi-copper oxidase type I family protein
nearly identical to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Multicopper
oxidase domain PF00394
Length = 554
Score = 26.6 bits (56), Expect = 6.1
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -3
Query: 187 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 101
N+TYG++ GV ++V+++ G P PN+
Sbjct: 33 NVTYGTVSPLGVPQQVILING-QFPGPNV 60
>At1g16370.1 68414.m01958 transporter-related low similarity to
organic cation transporter OCTN1 from [Homo sapiens]
GI:2605501, [Mus musculus] GI:4126605, [Rattus
norvegicus] GI:5679326; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 521
Score = 26.6 bits (56), Expect = 6.1
Identities = 14/62 (22%), Positives = 30/62 (48%)
Frame = -2
Query: 386 FKKIVRKSII*VGNLFNSK**FMRIWSGVSPHFRCIASWHRLGRCLCDRSMPSTWRSPQD 207
F + + S++ + LF+++ F+ +++ P +WH L +CD S + P+
Sbjct: 43 FWQFFQISLVGLALLFDAQQIFITVYTDAYP------TWHCLNHTICDPSASDICKLPRS 96
Query: 206 RW 201
W
Sbjct: 97 AW 98
>At3g61740.1 68416.m06923 PHD finger family protein (ATX3) contains
Pfam domains PF00628: PHD-finger and PF00855: PWWP
domain; identical to cDNA trithorax 3 (ATX3) partial cds
GI:15217142
Length = 799
Score = 26.2 bits (55), Expect = 8.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 220 RQVEGMERSQRHLPRRCQEAIHRKC 294
R VE E ++ + RCQ A+H++C
Sbjct: 497 RWVEDWEENKMIICNRCQVAVHQEC 521
>At1g55570.1 68414.m06360 multi-copper oxidase type I family protein
nearly identical to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Multicopper
oxidase domain PF00394
Length = 555
Score = 26.2 bits (55), Expect = 8.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 187 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 101
N+TYG+ GV ++V+++ G P PN+
Sbjct: 34 NVTYGTASPLGVPQQVILING-QFPGPNI 61
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,977,062
Number of Sequences: 28952
Number of extensions: 187585
Number of successful extensions: 574
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 575830496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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