Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10c06r
(679 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0382 + 17135554-17136468,17136762-17136833,17137675-171377... 35 0.052
07_03_1043 + 23506148-23506226,23506344-23506693,23506782-23507075 33 0.28
01_06_0133 - 26793335-26793380,26793696-26793907,26794009-267941... 31 0.64
02_01_0412 - 3005600-3007759 31 0.85
09_04_0613 + 18953761-18953932,18954672-18954799,18954885-189549... 31 1.1
08_02_0977 + 23227081-23228004,23228244-23228315,23229788-232298... 31 1.1
07_03_1723 - 29038701-29039213,29039341-29039413,29039504-290395... 31 1.1
04_04_1374 - 33028790-33028951,33029033-33029087,33029402-330294... 31 1.1
02_01_0413 - 3028946-3031111 31 1.1
03_02_0839 - 11653332-11653373,11653515-11653586,11653678-11654223 30 1.5
03_02_0033 - 5148513-5148806,5148928-5149271,5149391-5149472 30 1.5
03_01_0226 + 1795120-1795686,1796040-1796171 30 1.5
11_04_0467 + 18039458-18039638,18040136-18040227,18040336-180404... 30 2.0
09_06_0122 + 20990754-20991263,20992635-20992748 30 2.0
04_04_0717 - 27525117-27525248,27525384-27525549,27525629-275258... 30 2.0
03_06_0104 + 31671752-31672207 30 2.0
02_01_0411 - 2998806-3000938 30 2.0
07_03_1729 + 29091765-29092358,29092468-29092539,29093187-29093330 29 2.6
01_06_1465 - 37551996-37552061,37552206-37552277,37552373-37552987 29 2.6
05_05_0296 + 23918065-23918907,23919206-23919277,23919330-23919386 29 3.4
09_06_0056 - 20561645-20561920,20562024-20562611,20562698-205630... 29 4.5
02_01_0422 - 3084940-3087072 29 4.5
07_03_0918 - 22581625-22581687,22581773-22581868,22581980-225822... 28 6.0
01_06_1007 - 33733500-33733604,33733837-33733917,33734191-337342... 28 6.0
01_05_0491 - 22680011-22680125,22680210-22680307,22680392-226804... 28 7.9
>09_04_0382 +
17135554-17136468,17136762-17136833,17137675-17137704,
17138744-17138817,17140022-17140367
Length = 478
Score = 35.1 bits (77), Expect = 0.052
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = -3
Query: 518 KNNEASKRSRMNRKLKELQMEQLAIDLEERNKKL-RVKADILEELTKKVKDAL 363
KN E++ RSR ++ L++E L+E NK+L R +ADI+E +V++ +
Sbjct: 292 KNRESAARSRARKQAYTLELEAEVQKLKEMNKELERKQADIMEMQKNEVEEMI 344
>07_03_1043 + 23506148-23506226,23506344-23506693,23506782-23507075
Length = 240
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = -3
Query: 575 DENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADIL 396
D +S ++ + EL + + R EL ++ + + +N++ R K+ +L
Sbjct: 60 DPKKRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLL 119
Query: 395 EELTKKVKDALMAAILQK 342
EE K+K A AAIL K
Sbjct: 120 EEEFSKLKHAHDAAILHK 137
>01_06_0133 -
26793335-26793380,26793696-26793907,26794009-26794134,
26794258-26794335,26794857-26795014,26795230-26795278,
26795369-26795414,26795527-26795654,26796154-26796237,
26796317-26796409,26796505-26796549,26796792-26796851
Length = 374
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = -3
Query: 548 QESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEELTKKVK 372
+ESK + N E+++RSR+ ++ + ++ + L N LR + L E +KK++
Sbjct: 224 KESKRERRKQSNRESARRSRLRKQAETEELARKVELLTAENTSLRREISRLTESSKKLR 282
>02_01_0412 - 3005600-3007759
Length = 719
Score = 31.1 bits (67), Expect = 0.85
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +1
Query: 184 IKDTYYPCQYATCIVLLCSLVKTEKSTVVDLLSNKMQMLMSFNNTQNIHNLLHFCKIAAI 363
I ++ Y C T + L + + + + + L + + + +S+NN NI N LH K +
Sbjct: 366 IPESIYSCSNLTSLRLSANRLHGQLTKNIGNLKSIIFLSISYNNFTNITNTLHILK-SLR 424
Query: 364 NASFTFLVSSSK 399
N S F+ S+ K
Sbjct: 425 NLSVLFMGSNFK 436
>09_04_0613 +
18953761-18953932,18954672-18954799,18954885-18954956,
18955033-18955146,18955547-18955615,18955691-18955747,
18956262-18956315,18956387-18956449,18956543-18956605,
18956803-18956967,18957111-18957266,18957315-18957416
Length = 404
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = -3
Query: 578 IDENSSNISTQESKYRELRDKNNEASKRS--RMNRKLKEL--QMEQLAIDLEERNKKLRV 411
I+E S I+T +S+ L K + A++ + N + EL Q+E+L D+E +N K
Sbjct: 82 IEEKSKKIATLQSEITSLETKRSLAAEEQAGKANARAIELEKQIEKLKKDIEAQNSKKST 141
Query: 410 KADILEELTKKVKD 369
+ KKV++
Sbjct: 142 VEARAGDADKKVQE 155
>08_02_0977 +
23227081-23228004,23228244-23228315,23229788-23229841,
23231763-23231840,23233080-23233173,23233352-23233423,
23233537-23233584,23233608-23233777,23234016-23234088,
23234850-23235199
Length = 644
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = -3
Query: 518 KNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEELTK 381
KN E++ RSR ++ +++E L+E+N +L+ K + + E+ K
Sbjct: 295 KNRESAARSRARKQAYTMELEAEVQKLKEQNMELQKKQEEIMEMQK 340
>07_03_1723 - 29038701-29039213,29039341-29039413,29039504-29039594,
29039684-29039741,29039829-29039905,29040004-29040214,
29040339-29040386,29042496-29042608,29043270-29043341,
29044372-29046336,29046434-29046641,29046847-29047165,
29047813-29047937,29048024-29048157,29049089-29049164,
29049276-29049428,29049829-29050532,29050636-29050811,
29050945-29051107,29051199-29051341,29051802-29051914,
29053113-29053237,29053867-29054016,29054753-29054921,
29055201-29055418,29055499-29055709
Length = 2135
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/53 (24%), Positives = 31/53 (58%)
Frame = -3
Query: 500 KRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEELTKKVKDALMAAILQK 342
+R ++R L L+ ++ + + ++L++ +D+ KK+ D+ MAA+ Q+
Sbjct: 987 RRESLDRSLASLEPQKTTVKRIAQQQRLKISSDLPFRSNKKIFDSQMAAMSQE 1039
>04_04_1374 -
33028790-33028951,33029033-33029087,33029402-33029466,
33029558-33029701,33029825-33029878,33029971-33030220,
33030340-33030446,33031206-33031216,33032682-33032796,
33032897-33033005,33033088-33033203,33033288-33033647
Length = 515
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = -3
Query: 509 EASKRSRMNRKLKELQ--MEQLAIDLEERNK-KLRVKADILEELTKKVKDALMAAILQK 342
E K + MN KL + Q + ++EER + +L++K D + +L +++KD + LQK
Sbjct: 416 EKKKLADMNEKLTKNQDIWRRTLKEIEERERAQLKLKDDTIRDLEEQIKDFKFSIKLQK 474
>02_01_0413 - 3028946-3031111
Length = 721
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 184 IKDTYYPCQYATCIVLLCSLVKTEKSTVVDLLSNKMQMLMSFNNTQNIHNLLHFCK 351
I ++ Y C T + L + + E + ++ L + + +S+NN +NI N LH K
Sbjct: 367 IPESIYSCSNLTWLRLSTNKLHGELTKKIENLKSITFISLSYNNFKNITNTLHILK 422
>03_02_0839 - 11653332-11653373,11653515-11653586,11653678-11654223
Length = 219
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -3
Query: 518 KNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRV 411
KN E++ RSR ++ ++E LEE NK+LR+
Sbjct: 169 KNRESAARSRARKQAYTNELENKISRLEEENKRLRM 204
>03_02_0033 - 5148513-5148806,5148928-5149271,5149391-5149472
Length = 239
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/71 (22%), Positives = 38/71 (53%)
Frame = -3
Query: 557 ISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEELTKK 378
+S +++++ E+ K + R + EL ++ + + +N++ R K+ ++EE K
Sbjct: 65 LSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAK 124
Query: 377 VKDALMAAILQ 345
++ A A +LQ
Sbjct: 125 LRSAHDAVVLQ 135
>03_01_0226 + 1795120-1795686,1796040-1796171
Length = 232
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 554 STQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKK-LRVKADILEELTK 381
S + E +K EA+ R NR+L EL+ +QLA ++K RV ++ ++T+
Sbjct: 46 SRSARRREEDAEKRAEAAARRAENRRLAELEQQQLAAAARRPDRKAARVGGPVVPKVTE 104
>11_04_0467 + 18039458-18039638,18040136-18040227,18040336-18040452,
18041228-18041313,18041385-18041643,18041761-18041957,
18042181-18042213,18043371-18043862,18044236-18044299,
18045478-18045618,18045726-18045803,18047077-18047166,
18047260-18047352,18047430-18047489,18047567-18047635,
18047737-18047823,18048337-18048379,18048517-18048587,
18049050-18049143,18050335-18050447,18050909-18050998,
18051075-18051155,18052211-18052291,18052369-18052464,
18052543-18052599,18052693-18052737,18052807-18052872,
18052961-18052999
Length = 1004
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 554 STQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEELTK-- 381
S Q+ E DK+ S+ +++RKL L +EQ A + E+ +++ A+ L +
Sbjct: 818 SFQDDFIEEFADKHIAKSQFVQLDRKLITLSLEQRA-QILEKQRQINTYAECLRNILTDL 876
Query: 380 KVKDALMA 357
K+KD L +
Sbjct: 877 KLKDGLQS 884
>09_06_0122 + 20990754-20991263,20992635-20992748
Length = 207
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -3
Query: 518 KNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVK 408
KN E++ RSR ++ + +E L++ NK LRVK
Sbjct: 131 KNRESAARSRARKQARVNNLETEVEQLKQENKMLRVK 167
>04_04_0717 -
27525117-27525248,27525384-27525549,27525629-27525831,
27525911-27526048,27526642-27526725,27526864-27526950,
27527048-27527120,27527169-27527432,27527692-27527768,
27527886-27527957,27528049-27528209,27528238-27528484,
27528588-27528707,27528846-27528929,27529205-27529341,
27529689-27529856,27530093-27530317,27530865-27530952,
27531033-27531194,27532797-27532919
Length = 936
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -3
Query: 596 LSSTCSIDENSSNISTQESKYRELRDKNNEASKRSRM-NRKLKELQMEQLAIDLEERNKK 420
LSS ++ + SN+ + + E ++S R R +R+LKE ++ A +LEE N K
Sbjct: 213 LSSLNNVVQALSNLQLKHKQLAEDYQNQRDSSARKRAEHRRLKE-ELASAASELEETNYK 271
Query: 419 L 417
L
Sbjct: 272 L 272
>03_06_0104 + 31671752-31672207
Length = 151
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = -3
Query: 590 STCSIDENSSNISTQESKYRELRDKNNEAS-KRSRMNR--KLKELQMEQLAIDLEERNKK 420
+ + +E + + +E + R+ R +N S +RSR + +L+EL+ E + E R
Sbjct: 37 NAAAAEEENGEVEEEEERRRQRRKVSNRLSARRSRARKQQRLEELRGESARLRAENRELA 96
Query: 419 LRVKADILEELTKKVKDALMAA 354
R+ A L + ++A + A
Sbjct: 97 ARLHAVARHGLAARCQNARLRA 118
>02_01_0411 - 2998806-3000938
Length = 710
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +1
Query: 184 IKDTYYPCQYATCIVLLCSLVKTEKSTVVDLLSNKMQMLMSFNNTQNIHNLLHFCKIAAI 363
I ++ Y C T + L + + + S + L + + +S+NN NI N LH K +
Sbjct: 356 IPESIYSCSNLTWLRLSANRLHGQLSKNIGNLKSITFLSISYNNFTNITNTLHILK-SLR 414
Query: 364 NASFTFLVSSSK 399
N + F+ S+ K
Sbjct: 415 NLTVLFMGSNFK 426
>07_03_1729 + 29091765-29092358,29092468-29092539,29093187-29093330
Length = 269
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 518 KNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEELT-KKVKDALMAAILQK 342
KN E++ RSR ++ ++E LEE N++LR + + T D L A + QK
Sbjct: 185 KNRESAARSRARKQAYTNELENKISRLEEENQRLREHKAVADFSTFPSCVDFLKAFLTQK 244
>01_06_1465 - 37551996-37552061,37552206-37552277,37552373-37552987
Length = 250
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 518 KNNEASKRSRMNRKLKELQMEQLAIDLEERNKKL 417
KN E++ RSR ++ ++E L LEE N K+
Sbjct: 192 KNRESAARSRERKQAYIAELESLVTQLEEENAKM 225
>05_05_0296 + 23918065-23918907,23919206-23919277,23919330-23919386
Length = 323
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -3
Query: 518 KNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLR 414
KN E++ RSR ++ ++E + LEE N++L+
Sbjct: 268 KNRESAARSRARKQAYTNELENKVLRLEEENERLK 302
>09_06_0056 -
20561645-20561920,20562024-20562611,20562698-20563055,
20563149-20563483,20563593-20563633,20563722-20563932,
20564289-20564348,20564432-20564457,20565066-20565264
Length = 697
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/88 (27%), Positives = 45/88 (51%)
Frame = -3
Query: 605 DSTLSSTCSIDENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERN 426
D + S S E+ +++ + K + + +K +R RKL+E + E+ A+DL ++
Sbjct: 140 DDKVKSENSSAEHELSLTDKTPKDDTAEHQVDAPAKNAR--RKLREKRREKRAMDLVRKD 197
Query: 425 KKLRVKADILEELTKKVKDALMAAILQK 342
+ RVK LE + A+ +A+L K
Sbjct: 198 DEARVK---LENAAIERSKAVDSAVLGK 222
>02_01_0422 - 3084940-3087072
Length = 710
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 184 IKDTYYPCQYATCIVLLCSLVKTEKSTVVDLLSNKMQMLMSFNNTQNIHNLLHFCK 351
I ++ Y C T + L + + + + + L++ + +S+NN NI N LH K
Sbjct: 354 IPESIYSCSNLTWLRLSSNRLHGQLTKNIQNLNSITFLSLSYNNFTNIKNTLHILK 409
>07_03_0918 - 22581625-22581687,22581773-22581868,22581980-22582268,
22582341-22582477,22582567-22582683,22583277-22583440,
22583542-22583756,22583838-22584004,22584206-22584559,
22584647-22584795,22584907-22585030,22585132-22585371,
22585723-22586140,22586297-22586920,22586999-22587183,
22587302-22587412,22587583-22587789,22587869-22587967,
22588063-22588159,22588296-22588384,22588495-22588548,
22588671-22588793,22588872-22588940,22589020-22589089,
22589202-22589260,22589367-22589570,22590032-22590060,
22590375-22590433,22590513-22590634,22591637-22591830,
22591974-22592088
Length = 1680
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = +1
Query: 241 LVKTEKSTVVDLLSNKMQMLMSFNNTQNIHNLLH 342
L T+++ ++D+L + ++ S+N+T N+ +H
Sbjct: 1493 LKTTQQTAIMDILLSLLEFASSYNSTSNLRTRMH 1526
>01_06_1007 -
33733500-33733604,33733837-33733917,33734191-33734238,
33734364-33734549,33735148-33735678,33735823-33735864,
33735945-33736065,33736200-33736281,33737169-33737227,
33738492-33738564,33738694-33738913
Length = 515
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = -3
Query: 533 RELRDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLRVKADILEELTKKVKDAL 363
R LRD N + + + + + + E+LA EER++ +++A I EE ++ +A+
Sbjct: 160 RSLRDDPNYDALIAALYPDIDKYEEEELAFSEEERSRNKKIQATI-EETIRRQSEAV 215
>01_05_0491 -
22680011-22680125,22680210-22680307,22680392-22680472,
22680564-22680677,22680757-22680823,22680947-22681017,
22681099-22681236,22681324-22681530,22681630-22681773,
22681856-22682017,22682117-22682173,22682256-22682348,
22682425-22682542,22682678-22682817,22683031-22683590,
22683703-22683805
Length = 755
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/26 (57%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = -3
Query: 485 NRKLKEL--QMEQLAIDLEERNKKLR 414
NR+L+E +ME A DLEE N+KLR
Sbjct: 259 NRQLQESLKRMEMKASDLEEENQKLR 284
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,229,265
Number of Sequences: 37544
Number of extensions: 270710
Number of successful extensions: 756
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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