Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c06r
         (679 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.9  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   5.1  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   8.9  
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    23   8.9  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -3

Query: 581 SIDENSSNISTQESKYRELRDKNNEASKRSRMNRKLKELQME 456
           S+    + I+ +E+K REL  K  E        +K KE++ +
Sbjct: 23  SLQAIEARIADEEAKQRELERKRAEGESDFGRKKKKKEIRYD 64


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/55 (20%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = -3

Query: 578 IDENSSNISTQESKYRELRDKNNEAS-KRSRMNRKLKELQMEQLAIDLEERNKKL 417
           I    S I     ++ +L+++++  + + + + ++L +   +Q   ++EE NKK+
Sbjct: 696 ISAEVSKIEKTAHRFGQLKEQHDMLNYELNNLKQRLAQTSFQQTKEEIEELNKKI 750


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 524  RDKNNEASKRSRMNRKLKELQMEQLAIDLEERNKKLR 414
            RD + E  +R+  NR+  E+Q +QL  + +ER  + R
Sbjct: 1076 RDWDTEREQRAASNREEAEIQ-QQLQREEDERRTEER 1111


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 154 FFLCVVQVVFIKDTYYPCQYATCIVLLCSLVKTEKSTVVDL 276
           FF C +++  + D       A   +L CS+ +  +ST  DL
Sbjct: 351 FFNCYLKLGDVMDVLALVNSAINFILYCSMSRQFRSTFNDL 391


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 632,963
Number of Sequences: 2352
Number of extensions: 11729
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)