Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c06f
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    27   0.16 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   1.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   3.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.0  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 9/39 (23%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 425 NEKQRNRYVIYRYIVMFIWIFFLLERF-FAHLVCEQIIL 312
           NE +   Y+I+ ++ +F W+  L+  + F  ++  + +L
Sbjct: 89  NEPKLRHYLIFIFVNVFFWVIILMSNYAFTRIILLKSVL 127


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 468 SPAWWLDFNYFLFAFNIAFSLII 536
           +P +WL   +FLF   I  +LII
Sbjct: 663 NPGYWLFHCHFLFHIVIGMNLII 685


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = -3

Query: 431 ILNEKQRNRYVIYRYIVMFIWIFFLLERFFAHL-VCEQIILTERK 300
           I NE++RN + +   I   +W F +    F++L +  Q  L  +K
Sbjct: 318 ICNEEERNSHCLGGTITRTMWYFQICGSAFSYLFIMLQFDLNNKK 362


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 468 SPAWWLDFNYFLFAFNIAFSLIIR 539
           +P +WL   +FLF   I  +L+++
Sbjct: 663 NPGFWLFHCHFLFHIVIGMNLVLQ 686


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 367 FFSFWNVSLRIWSV 326
           FF+F NV + +W++
Sbjct: 429 FFTFCNVLMEMWNI 442


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,622
Number of Sequences: 336
Number of extensions: 2619
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)