Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c03r
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    28   0.36 
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   1.9  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    24   4.4  

>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 312 CLGNNSVAVVEIETSRPICIERYKDVKELGRVMLRVAGVTIAAG 181
           C  N+   + +++  RPIC + Y D      V+     VT A G
Sbjct: 397 CRSNSYPQLEQVKQDRPICCQEYADCANRHSVVTLPQPVTAAGG 440


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 460 SGLETCCNRNLLNRIAEYVSN*HILHVHPRQ 552
           +GL     R +LNR+ E++ N    H+ P Q
Sbjct: 517 NGLGKVLERLILNRLNEFLENGETSHLSPNQ 547


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 219 HDQAP*HLYISRCIWACWSQFQQL 290
           H Q+  H+   R IW  W+  Q L
Sbjct: 308 HPQSNFHIIDPRSIWRAWTALQDL 331


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,171
Number of Sequences: 2352
Number of extensions: 14933
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)