Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10c02r
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81094-3|CAB03151.1| 477|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical p... 32 0.48
Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical p... 32 0.48
Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical pr... 32 0.48
AB011281-1|BAA24961.1| 254|Caenorhabditis elegans GAP-2-5 protein. 32 0.48
AB011277-1|BAA24957.1| 269|Caenorhabditis elegans GAP-2-1 protein. 32 0.48
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl cyc... 28 5.9
>Z81094-3|CAB03151.1| 477|Caenorhabditis elegans Hypothetical
protein F58G11.4 protein.
Length = 477
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 301 CLSSSLMCASTSKPTFTSLKFNLPRTNAVGTLA-PFTISLVTLCSIFVTSIFS 456
C + + T P F + FN+ R +AVGT++ F I+ V S++ T +F+
Sbjct: 257 CQNFTYYAIETLAPAFMMMMFNMERDSAVGTMSIIFFIAGVFALSLYSTFVFT 309
>Z46266-14|CAA86419.1| 1048|Caenorhabditis elegans Hypothetical
protein ZK899.8e protein.
Length = 1048
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 305 RHYTGAFTHILVQYELNVHKNLVSGELHTSMRLLSLMPSATVRMDYMPTDSITEALSRRF 126
R ++GA T +VH NL++G + +S LS S + + PT++ LSR F
Sbjct: 37 RGWSGASTGNRTTLTASVHNNLMNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPF 96
>Z46266-10|CAA86416.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 305 RHYTGAFTHILVQYELNVHKNLVSGELHTSMRLLSLMPSATVRMDYMPTDSITEALSRRF 126
R ++GA T +VH NL++G + +S LS S + + PT++ LSR F
Sbjct: 196 RGWSGASTGNRTTLTASVHNNLMNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPF 255
>Z37979-5|CAA86037.1| 1048|Caenorhabditis elegans Hypothetical
protein ZK899.8e protein.
Length = 1048
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 305 RHYTGAFTHILVQYELNVHKNLVSGELHTSMRLLSLMPSATVRMDYMPTDSITEALSRRF 126
R ++GA T +VH NL++G + +S LS S + + PT++ LSR F
Sbjct: 37 RGWSGASTGNRTTLTASVHNNLMNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPF 96
>Z37979-1|CAA86034.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 305 RHYTGAFTHILVQYELNVHKNLVSGELHTSMRLLSLMPSATVRMDYMPTDSITEALSRRF 126
R ++GA T +VH NL++G + +S LS S + + PT++ LSR F
Sbjct: 196 RGWSGASTGNRTTLTASVHNNLMNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPF 255
>Z37140-8|CAA85503.1| 1207|Caenorhabditis elegans Hypothetical
protein ZK899.8a protein.
Length = 1207
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 305 RHYTGAFTHILVQYELNVHKNLVSGELHTSMRLLSLMPSATVRMDYMPTDSITEALSRRF 126
R ++GA T +VH NL++G + +S LS S + + PT++ LSR F
Sbjct: 196 RGWSGASTGNRTTLTASVHNNLMNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPF 255
>AB011281-1|BAA24961.1| 254|Caenorhabditis elegans GAP-2-5 protein.
Length = 254
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 305 RHYTGAFTHILVQYELNVHKNLVSGELHTSMRLLSLMPSATVRMDYMPTDSITEALSRRF 126
R ++GA T +VH NL++G + +S LS S + + PT++ LSR F
Sbjct: 37 RGWSGASTGNRTTLTASVHNNLMNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPF 96
>AB011277-1|BAA24957.1| 269|Caenorhabditis elegans GAP-2-1 protein.
Length = 269
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -1
Query: 305 RHYTGAFTHILVQYELNVHKNLVSGELHTSMRLLSLMPSATVRMDYMPTDSITEALSRRF 126
R ++GA T +VH NL++G + +S LS S + + PT++ LSR F
Sbjct: 196 RGWSGASTGNRTTLTASVHNNLMNGRMSSSSHNLSTRLSGSTQNLNQPTNAYGNLLSRPF 255
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
protein C18H2.1 protein.
Length = 1770
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 441 DIYLLYGH*KPVSVSRVSGYQEVVELFI 524
D+Y YG+ P+ V+ SGY E+VE+ I
Sbjct: 887 DVYSKYGN-TPLHVASKSGYPEIVEILI 913
>AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl
cyclase protein 19 protein.
Length = 1143
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 232 PDTKFLWTFNSYWTSMCVKAPV*CLSSSLMCASTSKPT 345
PD +L TF ++ V PV C + + + ASTS P+
Sbjct: 292 PDINYLNTFTMNCGAVVVNPPVSCATPACINASTSPPS 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,420,210
Number of Sequences: 27780
Number of extensions: 385559
Number of successful extensions: 1056
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1056
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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