Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c02f
         (641 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000393395 Cluster: COG3464: Transposase and inactiv...    35   1.5  
UniRef50_A1ZDJ2 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_A0LCK4 Cluster: Multi-sensor hybrid histidine kinase pr...    34   3.4  
UniRef50_Q22LP0 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_A5DVG7 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_A0CP35 Cluster: Chromosome undetermined scaffold_23, wh...    33   4.4  
UniRef50_A0H4F2 Cluster: Putative uncharacterized protein; n=2; ...    33   5.9  
UniRef50_Q98S64 Cluster: Putative uncharacterized protein orf479...    33   5.9  
UniRef50_UPI0000DB6F29 Cluster: PREDICTED: similar to CG9590-PA;...    33   7.7  
UniRef50_Q54I65 Cluster: Putative homeobox transcription factor;...    33   7.7  
UniRef50_A7RGC9 Cluster: Predicted protein; n=1; Nematostella ve...    33   7.7  

>UniRef50_UPI0000393395 Cluster: COG3464: Transposase and
           inactivated derivatives; n=1; Bifidobacterium longum
           DJO10A|Rep: COG3464: Transposase and inactivated
           derivatives - Bifidobacterium longum DJO10A
          Length = 177

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +3

Query: 393 DIVNGASVPTALVRGRL-NLRDVKVGF-DVDAHINDELRHYTGAF 521
           D  NGA+ PT  + GRL  LRD+ +GF ++D +I   L H TG F
Sbjct: 126 DHPNGANGPTEAINGRLETLRDIALGFRNLDNYITRSLLH-TGGF 169


>UniRef50_A1ZDJ2 Cluster: Putative uncharacterized protein; n=1;
           Microscilla marina ATCC 23134|Rep: Putative
           uncharacterized protein - Microscilla marina ATCC 23134
          Length = 1645

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 24/87 (27%), Positives = 45/87 (51%)
 Frame = +3

Query: 342 VSIEKIDVTNMEQRVTRDIVNGASVPTALVRGRLNLRDVKVGFDVDAHINDELRHYTGAF 521
           + ++ + +T  +Q  TR+IV  + +  A V+G+ +L ++   FD+ AH      +YTG  
Sbjct: 693 LELDSLRLTISQQDSTRNIVLKSDIMDAHVKGQFHLSELPQAFDIFAH-----SYYTGYA 747

Query: 522 THILVQYELNVHKNLVSGELHTSMRLL 602
           T  L     +  +  V+  +H + RLL
Sbjct: 748 TDSLKL--KHTEQFTVNAHIHKNPRLL 772


>UniRef50_A0LCK4 Cluster: Multi-sensor hybrid histidine kinase
           precursor; n=2; cellular organisms|Rep: Multi-sensor
           hybrid histidine kinase precursor - Magnetococcus sp.
           (strain MC-1)
          Length = 910

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 26/75 (34%), Positives = 39/75 (52%)
 Frame = +3

Query: 159 DTRARVQHHTEYYTKLIQKLVYELEKRGFCNLKLNDVIIEHNEQLYNFLVSGNATYTNGF 338
           D  +RVQ  T+  T+   +L+ E+E+R     +L     EH E L++ L     T  +GF
Sbjct: 366 DLTSRVQAQTQDLTQANARLLEEIEQRRTAEEELR----EHQELLHDIL----ETSVDGF 417

Query: 339 LVSIEKIDVTNMEQR 383
           LV   K +VT+  QR
Sbjct: 418 LVVDRKGNVTHSNQR 432


>UniRef50_Q22LP0 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1125

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
 Frame = +3

Query: 57  IIQIELLFD*YKMISSLVLILALSYASGQNNLVVDTR-----ARVQHHTEYYTKLIQKLV 221
           II I+++ + Y +I    +   L Y++ QN+ V+D +     A +Q+  +YY K+I+   
Sbjct: 224 IIDIQIISEDYIIIEYSKIAYLLIYSTNQNSFVIDIKQNAQLATIQNAAQYYQKIIEDSK 283

Query: 222 Y 224
           Y
Sbjct: 284 Y 284


>UniRef50_A5DVG7 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 927

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
 Frame = +3

Query: 258 LNDVIIEHNEQLYNFLVSGNATYTNGFLVSIEKIDVTNMEQRVTRDIVNGASVPTALVRG 437
           +N+V+ E  E +    V+   T+     +SIE I ++ +E    RD      + T LV  
Sbjct: 46  INEVLKEPLEHVREHNVTNLITFVRA--ISIELIRISKLES--WRD----GDIQTVLVCI 97

Query: 438 RLNLRDVKVGFDVDA-HINDELRHYTGAFTHI-LVQYELNVHKNLVSGELHTSMRLLSLM 611
           RL +R +   F+++  HI  E R +   F    L   + N+H+N V+G+L T++ L+SL+
Sbjct: 98  RLLVRVLPRIFEMETYHIGFEPRIWKQEFEPSQLDSLDTNLHENEVTGDLATNL-LMSLL 156


>UniRef50_A0CP35 Cluster: Chromosome undetermined scaffold_23, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_23,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 182

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +3

Query: 174 VQHHTEYYTKLIQKLVYELEKRGFCNLKLNDVIIEHNEQLYNFL 305
           +Q   + Y  L  KL+ E+E   +  +KLN  I  +N+QLYN +
Sbjct: 60  LQSQNQEYFSLTSKLIEEIESDNYFQIKLNQ-IQAYNKQLYNLI 102


>UniRef50_A0H4F2 Cluster: Putative uncharacterized protein; n=2;
           Chloroflexus|Rep: Putative uncharacterized protein -
           Chloroflexus aggregans DSM 9485
          Length = 87

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 365 HEYGTESHQGYCEWGERSYGVSSRKIEFKGRESWLRC 475
           H    E H+ Y E GER+ G + R +   G E W  C
Sbjct: 14  HRVSVEGHESYPETGERNTGFARRFLNGLGAEGWEVC 50


>UniRef50_Q98S64 Cluster: Putative uncharacterized protein orf479;
           n=1; Guillardia theta|Rep: Putative uncharacterized
           protein orf479 - Guillardia theta (Cryptomonas phi)
          Length = 479

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
 Frame = +3

Query: 60  IQIELLFD*YKMISSLVLILALSYASGQNNLVVDTRARVQHHTEYYTKLIQKLVYELEKR 239
           +   L FD YK++ +L     +S  S  + L   T   V     + T+LI+   Y+++ R
Sbjct: 99  LSTNLAFDYYKILKTLGYPFEMSIFSFSSKLNSRTVLSVITSLIWLTELIR---YDIKIR 155

Query: 240 GF-CNLKLNDVIIEHNEQLYNFLVSGNATYTNGFLV 344
            F CNLK  + I  + E  Y   ++  + Y N F +
Sbjct: 156 QFFCNLKEKNAIWNYFELSYRCFLTKGSKYENFFSI 191


>UniRef50_UPI0000DB6F29 Cluster: PREDICTED: similar to CG9590-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG9590-PA
           - Apis mellifera
          Length = 469

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
 Frame = +3

Query: 60  IQIELLFD*YKMISSLVLILALSYASGQNNLVVDTRARVQHHTEYYTKLIQKLVYELEKR 239
           +  E LFD Y+    LV I AL   S Q+N+ +          E  +  +QK++ E+E+ 
Sbjct: 269 VHFESLFDDYQ---GLVHIEALEMLSKQSNIKIQQHLNGLDINELNS--VQKMLEEVEEL 323

Query: 240 GFCNLKLN---DVIIE--HNEQLYNFLVSGNATYTN 332
             C+L +N   D + E   N Q+Y    + + TYTN
Sbjct: 324 SICDLGINITYDKLYEICQNSQVY---TTQSMTYTN 356


>UniRef50_Q54I65 Cluster: Putative homeobox transcription factor;
           n=1; Dictyostelium discoideum AX4|Rep: Putative homeobox
           transcription factor - Dictyostelium discoideum AX4
          Length = 1363

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = +3

Query: 210 QKLVYE-LEKRGFCNLKLNDVIIEHNEQLYN 299
           QK++ E L+K GF NL LN   IE+N+Q +N
Sbjct: 604 QKMIQEELKKNGFTNLLLNSPSIENNDQHHN 634


>UniRef50_A7RGC9 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 1034

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 3/146 (2%)
 Frame = +3

Query: 138 GQNNLVVDTRARVQHHTEYYTKLIQKLVYELEKRGFCNLKLNDVIIEHNEQLYNFLVSGN 317
           G NN    + ++++ HT+   K   +L Y L  R F   K   V I+   QL  F   GN
Sbjct: 229 GSNNSSAVSGSKIRSHTKVTPK--GRLRYGLS-RDFSFHKRAQVTIQDKTQLTGFSNLGN 285

Query: 318 ATYTNGFLVSIEKID--VTNMEQRVTRDIVNGASVPTALVRGRLNLRDVKVGFDVD-AHI 488
             Y N  L S+  I+    ++  +   ++V+ +        G L  +  K   DV   H+
Sbjct: 286 TCYMNAILQSLLGIEPFAQDLANKELHNLVSNSQCLLKSAYGLLCCKRNKCELDVQRMHL 345

Query: 489 NDELRHYTGAFTHILVQYELNVHKNL 566
               R  + A T      + + H+ L
Sbjct: 346 RKFKRQISEAATRFSGNLQHDAHEFL 371


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,420,208
Number of Sequences: 1657284
Number of extensions: 11909123
Number of successful extensions: 29400
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29390
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)