Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c02f
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.6  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2

Query: 113 NTGFVVCFRAK 145
           NT FVVCF AK
Sbjct: 309 NTDFVVCFNAK 319


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 296 VELFIMFYNYVIQFQIAEATFFQLIN*LLNKFCVVFCVMLH 174
           V L+I+   ++    I E     L    L+ FCV++ V+LH
Sbjct: 143 VILYILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVVLLH 183


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 296 VELFIMFYNYVIQFQIAEATFFQLIN*LLNKFCVVFCVMLH 174
           V L+I+   ++    I E     L    L+ FCV++ V+LH
Sbjct: 143 VILYILATVFLAYVWICEMGVVTLQAYTLHLFCVLYVVLLH 183


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 618 HWASDSTAS*KYEVPQTPN 562
           HW    + S   E+PQ PN
Sbjct: 250 HWHITDSQSFPLELPQLPN 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,221
Number of Sequences: 336
Number of extensions: 3053
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)