Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c02f
         (641 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.5  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   3.6  
DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.       23   6.2  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    23   8.2  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 27/120 (22%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
 Frame = +3

Query: 114 ILALSYASGQ-NNLVVDTRARVQHHTEYYTKLIQKLVYELEKRGFCNLKLNDVIIEHNEQ 290
           ++ LSY+  +  ++ V T   +QH T +Y+K ++ L+  +++    + KL D   + +++
Sbjct: 614 MIDLSYSEDRLADITVATHQFIQHFTFHYSKDVKPLLQTIQQ---SDHKLFDFEYDQHQR 670

Query: 291 LYNFLVSGNATYTNGFL------VSIEK-IDVTNMEQRVTRDIVNGASVPTALVRGRLNL 449
           L   +    A +   +        S++K +++T  E  V         V   L+ GRL L
Sbjct: 671 LSKIIYPNGAEWKPEYAQVTLNPTSLKKTMEITGSEANVYYGPDYAVVVDANLIDGRLLL 730


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 285 HYVL*LRHSISNCRSHVFPTH 223
           H++L    S++ CR H  PTH
Sbjct: 401 HHLLDSSESLNTCRLHGSPTH 421


>DQ974163-1|ABJ52803.1|  595|Anopheles gambiae serpin 4B protein.
          Length = 595

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 20/69 (28%), Positives = 30/69 (43%)
 Frame = +3

Query: 141 QNNLVVDTRARVQHHTEYYTKLIQKLVYELEKRGFCNLKLNDVIIEHNEQLYNFLVSGNA 320
           Q N+ +    R Q  T YY+  +Q L +EL+  G   L    V  + + ++ N L S   
Sbjct: 167 QRNIPLSDTYRNQSMT-YYSSEVQSLDFELDTSGSTRLINRWVSDKTHGKIPNILPSALP 225

Query: 321 TYTNGFLVS 347
             T   L S
Sbjct: 226 ASTTMVLAS 234


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 255 KLNDVIIEHNEQLYNFLVSGNATYTNGFLVSIEKIDVTNM 374
           K ++V   H E L      G   YT+G + +  KI +TN+
Sbjct: 242 KCSEVYNTHTECLSGL---GEKGYTSGIITAAAKIALTNL 278


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,878
Number of Sequences: 2352
Number of extensions: 13607
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)