Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c02f
         (641 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81094-3|CAB03151.1|  477|Caenorhabditis elegans Hypothetical pr...    32   0.40 
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl cyc...    28   4.9  

>Z81094-3|CAB03151.1|  477|Caenorhabditis elegans Hypothetical
           protein F58G11.4 protein.
          Length = 477

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -2

Query: 505 CLSSSLMCASTSKPTFTSLKFNLPRTNAVGTLA-PFTISLVTLCSIFVTSIFS 350
           C + +     T  P F  + FN+ R +AVGT++  F I+ V   S++ T +F+
Sbjct: 257 CQNFTYYAIETLAPAFMMMMFNMERDSAVGTMSIIFFIAGVFALSLYSTFVFT 309


>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
           protein C18H2.1 protein.
          Length = 1770

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 365 DIYLLYGH*KPVSVSRVSGYQEVVELFI 282
           D+Y  YG+  P+ V+  SGY E+VE+ I
Sbjct: 887 DVYSKYGN-TPLHVASKSGYPEIVEILI 913


>AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl
           cyclase protein 19 protein.
          Length = 1143

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = -2

Query: 574 PDTKFLWTFNSYWTSMCVKAPV*CLSSSLMCASTSKPT 461
           PD  +L TF     ++ V  PV C + + + ASTS P+
Sbjct: 292 PDINYLNTFTMNCGAVVVNPPVSCATPACINASTSPPS 329


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,292,396
Number of Sequences: 27780
Number of extensions: 298482
Number of successful extensions: 698
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)