Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c01r
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.47 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.47 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.47 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.47 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   7.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 175 IYQKFSVCNCLIFFISSIF 119
           IY   SV  CL+FF+S +F
Sbjct: 298 IYMFVSVWKCLLFFVSVLF 316


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 175 IYQKFSVCNCLIFFISSIF 119
           IY   SV  CL+FF+S +F
Sbjct: 298 IYMFVSVWKCLLFFVSVLF 316


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 175 IYQKFSVCNCLIFFISSIF 119
           IY   SV  CL+FF+S +F
Sbjct: 298 IYMFVSVWKCLLFFVSVLF 316


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 175 IYQKFSVCNCLIFFISSIF 119
           IY   SV  CL+FF+S +F
Sbjct: 298 IYMFVSVWKCLLFFVSVLF 316


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = -1

Query: 402 LMRTLHQYLLFLKSHQKTTHMMPARTPFYVVLRACSTQ 289
           L+  + QYL      Q   H +    P  +  ++CST+
Sbjct: 751 LLENVAQYLQIENVEQTLNHEIKKVIPGRITQKSCSTK 788


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 368 KNRRYWCRVRINHMSDQFSNVLIDEN 445
           KN   W ++R  H      +VLID N
Sbjct: 136 KNTALWKQLRYEHYRLYQLSVLIDNN 161


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = -2

Query: 398 CALCTSTFCS*NPIKRPPI*CQQGLHSTSC*GHVQPRRLG 279
           C + T   C  NP K     CQ  L   +C  +  P+  G
Sbjct: 412 CEIDTINECDSNPCKHLDAICQDKLGDYAC--YCPPKHTG 449


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,320
Number of Sequences: 336
Number of extensions: 3894
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)