Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10c01r
         (720 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49073-3|CAA88888.1|  121|Caenorhabditis elegans Hypothetical pr...   161   3e-40
Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical pr...    32   0.36 
Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical p...    32   0.36 
Z75955-11|CAB00125.1|  412|Caenorhabditis elegans Hypothetical p...    30   1.9  

>Z49073-3|CAA88888.1|  121|Caenorhabditis elegans Hypothetical
           protein ZK970.4 protein.
          Length = 121

 Score =  161 bits (392), Expect = 3e-40
 Identities = 73/117 (62%), Positives = 93/117 (79%)
 Frame = -3

Query: 634 AAVKGKLISVIGDEDTCVGFLLGGIGEINKNRHPNFMVVDKNTPVSEIEECFKRFVKRXX 455
           +A KGK+++VIGDEDT VGFLLGG+GE+NK R PN+++VDK T V EIEE F  F  R  
Sbjct: 3   SAAKGKILAVIGDEDTVVGFLLGGVGELNKARKPNYLIVDKQTTVQEIEEAFNGFCARDD 62

Query: 454 XXXILINQNIAELIRHVIDAHSAPVPSVLEIPSKDHPYDASKDSILRRAKGMFNPDD 284
              ILINQ+IAE+IR+ +D H+  +P+VLEIPSK+ PYD SKDSIL RA+G+FNP+D
Sbjct: 63  IAIILINQHIAEMIRYAVDNHTQSIPAVLEIPSKEAPYDPSKDSILNRARGLFNPED 119


>Z77131-7|CAB00857.2| 1034|Caenorhabditis elegans Hypothetical
           protein M01F1.7 protein.
          Length = 1034

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
 Frame = -3

Query: 559 GEINKNRHPNFMVVDKNTPVSEIEECFKRFVKRXXXXXILINQNIAELIRHVIDAHSAPV 380
           G+ + +   +    D NT  S IE C +R   +      ++N +    +  V+   S   
Sbjct: 340 GDFSPDNPADSKTTDTNTFSSTIETCVQRHYPQLRNRLHIVNVSCGHEMTQVVSKLSNIS 399

Query: 379 PSV--------LEIPSKDHPYDASKDSILRRAKGMFN 293
           PS         L +PS  H Y+ + +  +RRA   +N
Sbjct: 400 PSFGLLHPSLSLMLPSASHLYNEAVEGTIRRANETYN 436


>Z46381-11|CAA86520.2| 1034|Caenorhabditis elegans Hypothetical
           protein M01F1.7 protein.
          Length = 1034

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
 Frame = -3

Query: 559 GEINKNRHPNFMVVDKNTPVSEIEECFKRFVKRXXXXXILINQNIAELIRHVIDAHSAPV 380
           G+ + +   +    D NT  S IE C +R   +      ++N +    +  V+   S   
Sbjct: 340 GDFSPDNPADSKTTDTNTFSSTIETCVQRHYPQLRNRLHIVNVSCGHEMTQVVSKLSNIS 399

Query: 379 PSV--------LEIPSKDHPYDASKDSILRRAKGMFN 293
           PS         L +PS  H Y+ + +  +RRA   +N
Sbjct: 400 PSFGLLHPSLSLMLPSASHLYNEAVEGTIRRANETYN 436


>Z75955-11|CAB00125.1|  412|Caenorhabditis elegans Hypothetical
           protein R07B7.16 protein.
          Length = 412

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = +2

Query: 467 NKTLETFLDFTH--RCILIDHHEIRMSVFIDLTDAPE*ESDASVLIPDNTNQFSLNSCVK 640
           +KT E F   +H  R ILI H  +  S  +  + +        +L+PD T   S+  C+ 
Sbjct: 224 SKTFEFFSKISHEARMILIRHVSLIGSNMMSASFSMHHRKSDELLLPDGTVFGSIGGCLA 283

Query: 641 SHIFG 655
           S + G
Sbjct: 284 SEVLG 288


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,052,565
Number of Sequences: 27780
Number of extensions: 347218
Number of successful extensions: 864
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)