BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10b24r
(681 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U87939-1|AAC39921.1| 780|Homo sapiens aconitate hydratase protein. 167 2e-41
U80040-1|AAB38416.1| 780|Homo sapiens mitochondrial aconitase p... 167 2e-41
CR536568-1|CAG38805.1| 780|Homo sapiens ACO2 protein. 167 2e-41
CR456365-1|CAG30251.1| 780|Homo sapiens ACO2 protein. 167 2e-41
BC026196-1|AAH26196.1| 780|Homo sapiens aconitase 2, mitochondr... 167 2e-41
BC014092-1|AAH14092.1| 780|Homo sapiens aconitase 2, mitochondr... 167 2e-41
AL023553-4|CAI20278.1| 780|Homo sapiens aconitase 2, mitochondr... 167 2e-41
AL023553-3|CAM28239.1| 805|Homo sapiens aconitase 2, mitochondr... 167 2e-41
AL008582-4|CAI17931.1| 780|Homo sapiens aconitase 2, mitochondr... 167 2e-41
AL008582-3|CAM25244.1| 805|Homo sapiens aconitase 2, mitochondr... 167 2e-41
AF093096-1|AAD19351.2| 780|Homo sapiens aconitase protein. 167 2e-41
AF086790-1|AAC35557.1| 600|Homo sapiens aconitase precursor pro... 160 4e-39
Z11559-1|CAA77651.1| 889|Homo sapiens iron regulatory factor pr... 41 0.005
M58510-1|AAA69900.1| 816|Homo sapiens iron-responsive regulator... 41 0.005
DQ496106-1|ABF47095.1| 889|Homo sapiens aconitase 1, soluble pr... 41 0.005
BC018103-1|AAH18103.1| 889|Homo sapiens aconitase 1, soluble pr... 41 0.005
AL161783-2|CAH72598.1| 889|Homo sapiens aconitase 1, soluble pr... 41 0.005
AF261088-1|AAF99681.1| 790|Homo sapiens iron regulatory protein... 41 0.005
U77949-1|AAB38317.1| 560|Homo sapiens Cdc6-related protein prot... 30 8.8
BC025232-1|AAH25232.1| 560|Homo sapiens cell division cycle 6 h... 30 8.8
AY150310-1|AAN10296.1| 560|Homo sapiens CDC6 cell division cycl... 30 8.8
AF022109-1|AAC52071.1| 560|Homo sapiens HsCdc18p protein. 30 8.8
>U87939-1|AAC39921.1| 780|Homo sapiens aconitate hydratase protein.
Length = 780
Score = 167 bits (407), Expect = 2e-41
Identities = 75/107 (70%), Positives = 89/107 (83%)
Frame = -3
Query: 679 EHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKIKPDDKISLLGLNS 500
EHAALEPRHLGGRAII KSFARIHETNLKKQG+LPLTFA+ ADY+KI P DK+++ GL
Sbjct: 672 EHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKD 731
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRMKEI 359
PGKP+ C IKH +G+ + I LNH+ N+ QI WF+AGSALNRMKE+
Sbjct: 732 FTPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRMKEL 778
>U80040-1|AAB38416.1| 780|Homo sapiens mitochondrial aconitase
protein.
Length = 780
Score = 167 bits (407), Expect = 2e-41
Identities = 75/107 (70%), Positives = 89/107 (83%)
Frame = -3
Query: 679 EHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKIKPDDKISLLGLNS 500
EHAALEPRHLGGRAII KSFARIHETNLKKQG+LPLTFA+ ADY+KI P DK+++ GL
Sbjct: 672 EHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKD 731
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRMKEI 359
PGKP+ C IKH +G+ + I LNH+ N+ QI WF+AGSALNRMKE+
Sbjct: 732 FTPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRMKEL 778
>CR536568-1|CAG38805.1| 780|Homo sapiens ACO2 protein.
Length = 780
Score = 167 bits (407), Expect = 2e-41
Identities = 75/107 (70%), Positives = 89/107 (83%)
Frame = -3
Query: 679 EHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKIKPDDKISLLGLNS 500
EHAALEPRHLGGRAII KSFARIHETNLKKQG+LPLTFA+ ADY+KI P DK+++ GL
Sbjct: 672 EHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKD 731
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRMKEI 359
PGKP+ C IKH +G+ + I LNH+ N+ QI WF+AGSALNRMKE+
Sbjct: 732 FTPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRMKEL 778
>CR456365-1|CAG30251.1| 780|Homo sapiens ACO2 protein.
Length = 780
Score = 167 bits (407), Expect = 2e-41
Identities = 75/107 (70%), Positives = 89/107 (83%)
Frame = -3
Query: 679 EHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKIKPDDKISLLGLNS 500
EHAALEPRHLGGRAII KSFARIHETNLKKQG+LPLTFA+ ADY+KI P DK+++ GL
Sbjct: 672 EHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKD 731
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRMKEI 359
PGKP+ C IKH +G+ + I LNH+ N+ QI WF+AGSALNRMKE+
Sbjct: 732 FTPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRMKEL 778
>BC026196-1|AAH26196.1| 780|Homo sapiens aconitase 2, mitochondrial
protein.
Length = 780
Score = 167 bits (407), Expect = 2e-41
Identities = 75/107 (70%), Positives = 89/107 (83%)
Frame = -3
Query: 679 EHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKIKPDDKISLLGLNS 500
EHAALEPRHLGGRAII KSFARIHETNLKKQG+LPLTFA+ ADY+KI P DK+++ GL
Sbjct: 672 EHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKD 731
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRMKEI 359
PGKP+ C IKH +G+ + I LNH+ N+ QI WF+AGSALNRMKE+
Sbjct: 732 FTPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRMKEL 778
>BC014092-1|AAH14092.1| 780|Homo sapiens aconitase 2, mitochondrial
protein.
Length = 780
Score = 167 bits (407), Expect = 2e-41
Identities = 75/107 (70%), Positives = 89/107 (83%)
Frame = -3
Query: 679 EHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKIKPDDKISLLGLNS 500
EHAALEPRHLGGRAII KSFARIHETNLKKQG+LPLTFA+ ADY+KI P DK+++ GL
Sbjct: 672 EHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKD 731
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRMKEI 359
PGKP+ C IKH +G+ + I LNH+ N+ QI WF+AGSALNRMKE+
Sbjct: 732 FTPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRMKEL 778
>AL023553-4|CAI20278.1| 780|Homo sapiens aconitase 2, mitochondrial
protein.
Length = 780
Score = 167 bits (407), Expect = 2e-41
Identities = 75/107 (70%), Positives = 89/107 (83%)
Frame = -3
Query: 679 EHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKIKPDDKISLLGLNS 500
EHAALEPRHLGGRAII KSFARIHETNLKKQG+LPLTFA+ ADY+KI P DK+++ GL
Sbjct: 672 EHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKD 731
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRMKEI 359
PGKP+ C IKH +G+ + I LNH+ N+ QI WF+AGSALNRMKE+
Sbjct: 732 FTPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRMKEL 778
>AL023553-3|CAM28239.1| 805|Homo sapiens aconitase 2, mitochondrial
protein.
Length = 805
Score = 167 bits (407), Expect = 2e-41
Identities = 75/107 (70%), Positives = 89/107 (83%)
Frame = -3
Query: 679 EHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKIKPDDKISLLGLNS 500
EHAALEPRHLGGRAII KSFARIHETNLKKQG+LPLTFA+ ADY+KI P DK+++ GL
Sbjct: 697 EHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKD 756
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRMKEI 359
PGKP+ C IKH +G+ + I LNH+ N+ QI WF+AGSALNRMKE+
Sbjct: 757 FTPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRMKEL 803
>AL008582-4|CAI17931.1| 780|Homo sapiens aconitase 2, mitochondrial
protein.
Length = 780
Score = 167 bits (407), Expect = 2e-41
Identities = 75/107 (70%), Positives = 89/107 (83%)
Frame = -3
Query: 679 EHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKIKPDDKISLLGLNS 500
EHAALEPRHLGGRAII KSFARIHETNLKKQG+LPLTFA+ ADY+KI P DK+++ GL
Sbjct: 672 EHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKD 731
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRMKEI 359
PGKP+ C IKH +G+ + I LNH+ N+ QI WF+AGSALNRMKE+
Sbjct: 732 FTPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRMKEL 778
>AL008582-3|CAM25244.1| 805|Homo sapiens aconitase 2, mitochondrial
protein.
Length = 805
Score = 167 bits (407), Expect = 2e-41
Identities = 75/107 (70%), Positives = 89/107 (83%)
Frame = -3
Query: 679 EHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKIKPDDKISLLGLNS 500
EHAALEPRHLGGRAII KSFARIHETNLKKQG+LPLTFA+ ADY+KI P DK+++ GL
Sbjct: 697 EHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKD 756
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRMKEI 359
PGKP+ C IKH +G+ + I LNH+ N+ QI WF+AGSALNRMKE+
Sbjct: 757 FTPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRMKEL 803
>AF093096-1|AAD19351.2| 780|Homo sapiens aconitase protein.
Length = 780
Score = 167 bits (407), Expect = 2e-41
Identities = 75/107 (70%), Positives = 89/107 (83%)
Frame = -3
Query: 679 EHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKIKPDDKISLLGLNS 500
EHAALEPRHLGGRAII KSFARIHETNLKKQG+LPLTFA+ ADY+KI P DK+++ GL
Sbjct: 672 EHAALEPRHLGGRAIITKSFARIHETNLKKQGLLPLTFADPADYNKIHPVDKLTIQGLKD 731
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRMKEI 359
PGKP+ C IKH +G+ + I LNH+ N+ QI WF+AGSALNRMKE+
Sbjct: 732 FTPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRMKEL 778
>AF086790-1|AAC35557.1| 600|Homo sapiens aconitase precursor
protein.
Length = 600
Score = 160 bits (389), Expect = 4e-39
Identities = 73/107 (68%), Positives = 89/107 (83%)
Frame = -3
Query: 679 EHAALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTFANAADYDKIKPDDKISLLGLNS 500
EHAALEPRHLGGRAII KSFARIHET +KKQG+LPLTFA+ +DY+KI P DK+++ GL
Sbjct: 493 EHAALEPRHLGGRAIITKSFARIHET-IKKQGLLPLTFADPSDYNKIHPVDKLTIQGLKD 551
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRMKEI 359
APGKP+ C IKH +G+ + I LNH+ N+ QI WF+AGSALNRMKE+
Sbjct: 552 FAPGKPLKCIIKHPNGTQETILLNHTFNETQIEWFRAGSALNRMKEL 598
>Z11559-1|CAA77651.1| 889|Homo sapiens iron regulatory factor
protein.
Length = 889
Score = 40.7 bits (91), Expect = 0.005
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = -3
Query: 673 AALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTF--ANAADYDKIKPDDKISLLGLNS 500
AA P LG +A++ +S+ RIH +NL G++PL + AD + ++ +++ +
Sbjct: 783 AAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADALGLTGQERYTIIIPEN 842
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRM 368
L P V ++K G T + + D ++ +F G LN M
Sbjct: 843 LKPQMKV--QVKLDTGKTFQAVMRFD-TDVELTYFLNGGILNYM 883
>M58510-1|AAA69900.1| 816|Homo sapiens iron-responsive regulatory
protein/iron regulatory protein 1 protein.
Length = 816
Score = 40.7 bits (91), Expect = 0.005
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = -3
Query: 673 AALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTF--ANAADYDKIKPDDKISLLGLNS 500
AA P LG +A++ +S+ RIH +NL G++PL + AD + ++ +++ +
Sbjct: 710 AAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADALGLTGQERYTIIIPEN 769
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRM 368
L P V ++K G T + + D ++ +F G LN M
Sbjct: 770 LKPQMKV--QVKLDTGKTFQAVMRFD-TDVELTYFLNGGILNYM 810
>DQ496106-1|ABF47095.1| 889|Homo sapiens aconitase 1, soluble
protein.
Length = 889
Score = 40.7 bits (91), Expect = 0.005
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = -3
Query: 673 AALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTF--ANAADYDKIKPDDKISLLGLNS 500
AA P LG +A++ +S+ RIH +NL G++PL + AD + ++ +++ +
Sbjct: 783 AAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADALGLTGQERYTIIIPEN 842
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRM 368
L P V ++K G T + + D ++ +F G LN M
Sbjct: 843 LKPQMKV--QVKLDTGKTFQAVMRFD-TDVELTYFLNGGILNYM 883
>BC018103-1|AAH18103.1| 889|Homo sapiens aconitase 1, soluble
protein.
Length = 889
Score = 40.7 bits (91), Expect = 0.005
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = -3
Query: 673 AALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTF--ANAADYDKIKPDDKISLLGLNS 500
AA P LG +A++ +S+ RIH +NL G++PL + AD + ++ +++ +
Sbjct: 783 AAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADALGLTGQERYTIIIPEN 842
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRM 368
L P V ++K G T + + D ++ +F G LN M
Sbjct: 843 LKPQMKV--QVKLDTGKTFQAVMRFD-TDVELTYFLNGGILNYM 883
>AL161783-2|CAH72598.1| 889|Homo sapiens aconitase 1, soluble
protein.
Length = 889
Score = 40.7 bits (91), Expect = 0.005
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = -3
Query: 673 AALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTF--ANAADYDKIKPDDKISLLGLNS 500
AA P LG +A++ +S+ RIH +NL G++PL + AD + ++ +++ +
Sbjct: 783 AAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADALGLTGQERYTIIIPEN 842
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRM 368
L P V ++K G T + + D ++ +F G LN M
Sbjct: 843 LKPQMKV--QVKLDTGKTFQAVMRFD-TDVELTYFLNGGILNYM 883
>AF261088-1|AAF99681.1| 790|Homo sapiens iron regulatory protein 1
protein.
Length = 790
Score = 40.7 bits (91), Expect = 0.005
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = -3
Query: 673 AALEPRHLGGRAIIVKSFARIHETNLKKQGMLPLTF--ANAADYDKIKPDDKISLLGLNS 500
AA P LG +A++ +S+ RIH +NL G++PL + AD + ++ +++ +
Sbjct: 684 AAKGPFLLGIKAVLAESYERIHRSNLVGMGVIPLEYLPGENADALGLTGQERYTIIIPEN 743
Query: 499 LAPGKPVDCEIKHKDGSTDRIKLNHSLNDQQINWFKAGSALNRM 368
L P V ++K G T + + D ++ +F G LN M
Sbjct: 744 LKPQMKV--QVKLDTGKTFQAVMRFD-TDVELTYFLNGGILNYM 784
>U77949-1|AAB38317.1| 560|Homo sapiens Cdc6-related protein
protein.
Length = 560
Score = 29.9 bits (64), Expect = 8.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 350 SGSDFLHSVERRAGLE--PVDLLVVQRMVELDAVGAAVFVLNFAVHWLAGSEAV 505
+G D + +E+ E P+ +LV+ M +LD+ G V F WL+ S V
Sbjct: 259 AGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTLFEWPWLSNSHLV 312
>BC025232-1|AAH25232.1| 560|Homo sapiens cell division cycle 6
homolog (S. cerevisiae) protein.
Length = 560
Score = 29.9 bits (64), Expect = 8.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 350 SGSDFLHSVERRAGLE--PVDLLVVQRMVELDAVGAAVFVLNFAVHWLAGSEAV 505
+G D + +E+ E P+ +LV+ M +LD+ G V F WL+ S V
Sbjct: 259 AGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTLFEWPWLSNSHLV 312
>AY150310-1|AAN10296.1| 560|Homo sapiens CDC6 cell division cycle 6
homolog (S. cerevisiae) protein.
Length = 560
Score = 29.9 bits (64), Expect = 8.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 350 SGSDFLHSVERRAGLE--PVDLLVVQRMVELDAVGAAVFVLNFAVHWLAGSEAV 505
+G D + +E+ E P+ +LV+ M +LD+ G V F WL+ S V
Sbjct: 259 AGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTLFEWPWLSNSHLV 312
>AF022109-1|AAC52071.1| 560|Homo sapiens HsCdc18p protein.
Length = 560
Score = 29.9 bits (64), Expect = 8.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 350 SGSDFLHSVERRAGLE--PVDLLVVQRMVELDAVGAAVFVLNFAVHWLAGSEAV 505
+G D + +E+ E P+ +LV+ M +LD+ G V F WL+ S V
Sbjct: 259 AGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTLFEWPWLSNSHLV 312
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,149,603
Number of Sequences: 237096
Number of extensions: 1374069
Number of successful extensions: 2596
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2595
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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