Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b24f
         (582 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   3.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.4  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   5.8  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   5.8  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +2

Query: 281 SKFDKVPLPYEKLTKNLEVVKKRLGREL 364
           S    V +P+E+  +NL++ + + G EL
Sbjct: 545 SSQSSVTIPFERTFRNLDLNRPQGGEEL 572


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -1

Query: 414 CPLGSSK*EYRIFSDKVNSLPSLFLTTSKFF 322
           C L  S    ++F  K+    S+F+TT+ F+
Sbjct: 220 CNLTFSWYSKKVFYSKIIISGSIFMTTTSFY 250


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 296 PCRTWTSPPGPRRRS 252
           P R W+SPP  R  S
Sbjct: 121 PRREWSSPPDARAAS 135


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 296 PCRTWTSPPGPRRRS 252
           P R W+SPP  R  S
Sbjct: 277 PRREWSSPPDARAAS 291


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +1

Query: 403 PQRTGN*TRRKLSPPASRPCGHARRHC 483
           P+R  +  ++ L+P    P G   R+C
Sbjct: 411 PERFSDENKKNLTPYTYLPFGEGPRNC 437


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 401  DPKGQEIERGASYLRLRPDRVAMQDATAQMAMLQFIS 511
            D   QE+     YL+L P  +      A + ++QF++
Sbjct: 1308 DESTQEVHISKEYLQLEPIGLVFVFFFALILVIQFVA 1344


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 401  DPKGQEIERGASYLRLRPDRVAMQDATAQMAMLQFIS 511
            D   QE+     YL+L P  +      A + ++QF++
Sbjct: 1308 DESTQEVHISKEYLQLEPIGLVFVFFFALILVIQFVA 1344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,234
Number of Sequences: 336
Number of extensions: 2791
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)