Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10b22r
(652 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 26 0.36
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 25 0.84
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 25 0.84
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.84
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 0.84
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 25 0.84
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 3.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 4.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 4.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.9
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 21 7.8
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 25.8 bits (54), Expect = 0.36
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 332 SAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRD 472
S I+AG+++ NN +N + N + +G+G G + + +N D
Sbjct: 226 STITAGNANTNASNNNNNNNNNNNNNNGANDNGNG-NGASNNNNNGD 271
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.84
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 227 NNNFGQRLFGNVLNINGI 280
NNN+ ++L+ N++NI I
Sbjct: 105 NNNYNKKLYYNIINIEQI 122
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 24.6 bits (51), Expect = 0.84
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 227 NNNFGQRLFGNVLNINGI 280
NNN+ ++L+ N++NI I
Sbjct: 105 NNNYNKKLYYNIINIEQI 122
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.84
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -3
Query: 143 RNCWYPYHPGSR 108
+ C+YPYHP ++
Sbjct: 386 KTCYYPYHPSTQ 397
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 24.6 bits (51), Expect = 0.84
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -3
Query: 143 RNCWYPYHPGSR 108
+ C+YPYHP ++
Sbjct: 386 KTCYYPYHPSTQ 397
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.6 bits (51), Expect = 0.84
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 227 NNNFGQRLFGNVLNINGI 280
NNN+ ++L+ N++NI I
Sbjct: 325 NNNYNKKLYYNIINIEQI 342
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2
Query: 194 NVDFRKYGSGENNNFGQRLFGNVLNINGI 280
N ++ Y + N N+ + + N++NI I
Sbjct: 95 NNNYNNYNNNYNTNYKKLQYYNIINIEQI 123
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = +2
Query: 182 HGFRNVDFRKYGSGENNNFGQRLFGNVLNINGI 280
+ ++ ++ Y + N N+ + + N++NI I
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = +2
Query: 182 HGFRNVDFRKYGSGENNNFGQRLFGNVLNINGI 280
+ ++ ++ Y + N N+ + + N++NI I
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = +2
Query: 182 HGFRNVDFRKYGSGENNNFGQRLFGNVLNINGI 280
+ ++ ++ Y + N N+ + + N++NI I
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = +2
Query: 182 HGFRNVDFRKYGSGENNNFGQRLFGNVLNINGI 280
+ ++ ++ Y + N N+ + + N++NI I
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = +2
Query: 182 HGFRNVDFRKYGSGENNNFGQRLFGNVLNINGI 280
+ ++ ++ Y + N N+ + + N++NI I
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = +2
Query: 182 HGFRNVDFRKYGSGENNNFGQRLFGNVLNINGI 280
+ ++ ++ Y + N N+ + + N++NI I
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/33 (21%), Positives = 18/33 (54%)
Frame = +2
Query: 182 HGFRNVDFRKYGSGENNNFGQRLFGNVLNINGI 280
+ ++ ++ Y + N N+ + + N++NI I
Sbjct: 87 NNYKYSNYNNYNNNYNTNYKKLQYYNIINIEQI 119
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 327 RGVPSAPVTVTGAPSTMAGP 386
R VPSA + V P AGP
Sbjct: 990 RSVPSAELIVRTEPQRPAGP 1009
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 5.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 327 RGVPSAPVTVTGAPSTMAGP 386
R VPSA + V P AGP
Sbjct: 986 RSVPSAELIVRTEPQRPAGP 1005
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -3
Query: 176 PQPCPPRSRQARNCWYPYHPGS 111
PQP PP R R PG+
Sbjct: 78 PQPRPPHPRLRREAELEAEPGN 99
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = -3
Query: 176 PQPCPPRSRQARNCWYPYHPGS 111
PQP PP R R PG+
Sbjct: 134 PQPRPPHPRLRREAELEAEPGN 155
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,823
Number of Sequences: 438
Number of extensions: 3610
Number of successful extensions: 34
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -