Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b21f
         (537 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein.             31   2.0  
M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein.             31   2.0  
M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein.             31   2.0  
BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein.      31   2.0  
BC026018-1|AAH26018.2| 1083|Homo sapiens LAMB1 protein protein.        31   2.0  
L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain p...    30   4.5  
AC002044-1|AAC31674.1| 1190|Homo sapiens Alpha-fetoprotein enhan...    30   4.5  
BC032846-1|AAH32846.2|  304|Homo sapiens developmental pluripote...    30   6.0  
AK001575-1|BAA91765.1|  294|Homo sapiens protein ( Homo sapiens ...    30   6.0  
U02609-1|AAA18945.1|  519|Homo sapiens transducin-like protein p...    29   7.9  

>M61951-1|AAA59486.1| 1786|Homo sapiens laminin B1 protein.
          Length = 1786

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 302  RGCVAYFPDCSCWHEACVMWHVLWWDLTGRETR 204
            RG    FPDC+  H+   +W V+  +LT R  R
Sbjct: 1167 RGYSGVFPDCTPCHQCFALWDVIIAELTNRTHR 1199


>M61916-1|AAA59482.1| 1786|Homo sapiens laminin B1 protein.
          Length = 1786

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 302  RGCVAYFPDCSCWHEACVMWHVLWWDLTGRETR 204
            RG    FPDC+  H+   +W V+  +LT R  R
Sbjct: 1167 RGYSGVFPDCTPCHQCFALWDVIIAELTNRTHR 1199


>M55370-1|AAA59485.1| 1786|Homo sapiens laminin B1 protein.
          Length = 1786

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 302  RGCVAYFPDCSCWHEACVMWHVLWWDLTGRETR 204
            RG    FPDC+  H+   +W V+  +LT R  R
Sbjct: 1167 RGYSGVFPDCTPCHQCFALWDVIIAELTNRTHR 1199


>BC113455-1|AAI13456.1| 1786|Homo sapiens laminin, beta 1 protein.
          Length = 1786

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 302  RGCVAYFPDCSCWHEACVMWHVLWWDLTGRETR 204
            RG    FPDC+  H+   +W V+  +LT R  R
Sbjct: 1167 RGYSGVFPDCTPCHQCFALWDVIIAELTNRTHR 1199


>BC026018-1|AAH26018.2| 1083|Homo sapiens LAMB1 protein protein.
          Length = 1083

 Score = 31.5 bits (68), Expect = 2.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 302 RGCVAYFPDCSCWHEACVMWHVLWWDLTGRETR 204
           RG    FPDC+  H+   +W V+  +LT R  R
Sbjct: 464 RGYSGVFPDCTPCHQCFALWDVIIAELTNRTHR 496


>L32832-1|AAC14462.1| 3703|Homo sapiens zinc finger homeodomain
           protein protein.
          Length = 3703

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
 Frame = +1

Query: 112 VPHKIPATQACPLCQDRCRQIPGMECP-CSLDLVSRPVKSHHRTCHITHASCQQLQSGK 285
           VPH   A   C L    C    G+ECP C   L S      H T   +  SC+ L+  K
Sbjct: 617 VPHHQHAGSLCELGVGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPK 675


>AC002044-1|AAC31674.1| 1190|Homo sapiens Alpha-fetoprotein enhancer
           binding protein (3' partial) protein.
          Length = 1190

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
 Frame = +1

Query: 112 VPHKIPATQACPLCQDRCRQIPGMECP-CSLDLVSRPVKSHHRTCHITHASCQQLQSGK 285
           VPH   A   C L    C    G+ECP C   L S      H T   +  SC+ L+  K
Sbjct: 617 VPHHQHAGSLCELGVGECPSGSGVECPKCDTVLGSSRSLGGHMTMMHSRNSCKTLKCPK 675


>BC032846-1|AAH32846.2|  304|Homo sapiens developmental pluripotency
           associated 4 protein.
          Length = 304

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -2

Query: 197 LHGHSIPGI---WRHLSWHSGHAWV 132
           +HG S+P     W HL +H+G AWV
Sbjct: 233 VHGKSLPADTDGWVHLQFHAGQAWV 257


>AK001575-1|BAA91765.1|  294|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10713 fis, clone NT2RP3000980. ).
          Length = 294

 Score = 29.9 bits (64), Expect = 6.0
 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -2

Query: 197 LHGHSIPGI---WRHLSWHSGHAWV 132
           +HG S+P     W HL +H+G AWV
Sbjct: 223 VHGKSLPADTDGWVHLQFHAGQAWV 247


>U02609-1|AAA18945.1|  519|Homo sapiens transducin-like protein
           protein.
          Length = 519

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 116 LTKFRLPKHAHYART-DAAKSRVWNAHAAWTWFPARSSPTTEHAT*RM 256
           L K    K+    RT DA + +VW   A WT  P+    T E ++ RM
Sbjct: 472 LVKLWTIKNNECVRTLDAHEDKVWGLQAGWTTTPSLGPVTPESSSGRM 519


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,330,225
Number of Sequences: 237096
Number of extensions: 1621212
Number of successful extensions: 6645
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6645
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)