Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10b18r
(758 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0218 - 10437377-10437622,10437896-10438141,10438528-104386... 33 0.33
09_04_0537 + 18410201-18410207,18410301-18410586,18410674-184107... 32 0.57
06_03_0709 - 23759162-23759455,23759681-23759761,23759847-237599... 32 0.57
05_04_0124 + 18232961-18236636,18236810-18237288,18237549-182376... 32 0.57
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032... 32 0.57
05_06_0271 + 26836396-26836610,26836793-26836872,26837573-268376... 31 1.00
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 30 1.7
07_01_0609 + 4517467-4517529,4517627-4517701,4517914-4518030,451... 30 2.3
05_04_0395 - 20921606-20921869,20921971-20922112,20922206-209223... 30 2.3
05_04_0311 - 20120172-20122115 30 2.3
03_06_0603 + 34999083-34999703,35000092-35000177,35000400-350007... 30 2.3
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 29 3.0
01_06_0403 - 29060712-29060732,29061260-29061334,29061596-290617... 29 3.0
05_04_0123 + 18210069-18213737 29 4.0
07_03_0576 + 19638725-19638779,19638988-19639144,19639871-196401... 29 5.3
07_01_1122 - 10359014-10359127,10359686-10359769,10360375-10361331 29 5.3
>05_03_0218 -
10437377-10437622,10437896-10438141,10438528-10438611,
10438720-10438854
Length = 236
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = -3
Query: 321 NTPLIVDKIYSLFKPLLKSDVKEKIHF---HTPNSNTLFDYVHKDDLPKDLGGIRDS--- 160
NTP I + + + K L++ + EK+ F + P S+ + + DL + G R+S
Sbjct: 145 NTPRIFESFWKIIKHFLEAKMSEKVKFLYTNNPESHKIVSEMFDMDLLETAFGGRNSITI 204
Query: 159 -LDIYTKKMKEMMLTKRDVLARDDL 88
+D Y ++M+ L + ++ + D+
Sbjct: 205 DIDNYAERMRRSDLARGVLIIQTDI 229
>09_04_0537 +
18410201-18410207,18410301-18410586,18410674-18410773,
18410881-18411147,18411286-18411363,18411444-18411545,
18411628-18411677,18411793-18411889,18412248-18412361,
18412495-18412666,18412865-18413217,18413812-18413898,
18413981-18414001
Length = 577
Score = 31.9 bits (69), Expect = 0.57
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -3
Query: 378 ISKYQGGAMPMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIH-FHTPNSNTLFDYVH 202
+ K P L Q++V+N I++ K L KIH T + L + +
Sbjct: 236 MQKIDSDYYPETLHQMYVVNAGSGFKLIWNSVKGFLDPKTSSKIHVLGTNYQSRLLEVID 295
Query: 201 KDDLPKDLGG 172
K +LP+ LGG
Sbjct: 296 KSELPEFLGG 305
>06_03_0709 -
23759162-23759455,23759681-23759761,23759847-23759948,
23760068-23760163,23760256-23760315,23760496-23760549,
23760657-23760695,23761102-23761179,23761476-23761529,
23761797-23761880,23763447-23763475,23763602-23763659
Length = 342
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -3
Query: 351 PMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIH-FHTPNSNTLFDYVHKDDLP 187
P + + +++N P I + + KPLL+ ++K+H H + L + LP
Sbjct: 198 PEKAETYYIVNAPYIFSACWKVVKPLLQERTRKKVHVLHGCGRDELLKIMDHSSLP 253
>05_04_0124 +
18232961-18236636,18236810-18237288,18237549-18237629,
18238033-18238041,18238096-18238248
Length = 1465
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 183 DLGGIRDSLDIYTKKMKEMMLTKRDVLARDDLWRKNTAKPEA 58
D G D+L++ ++++E + KR +L DD+W ++ K EA
Sbjct: 245 DCGLKSDNLELLQQRLREELSQKRYLLVLDDVWNEDEQKWEA 286
>05_04_0122 +
18198594-18202269,18202551-18202591,18203273-18203281,
18203336-18203551,18204257-18204361,18204761-18204919
Length = 1401
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -3
Query: 183 DLGGIRDSLDIYTKKMKEMMLTKRDVLARDDLWRKNTAKPEA 58
D G D+L++ ++++E + KR +L DD+W ++ K EA
Sbjct: 245 DCGLKSDNLELLQQRLREELSQKRYLLVLDDVWNEDEQKWEA 286
>05_06_0271 +
26836396-26836610,26836793-26836872,26837573-26837641,
26837694-26837985,26838303-26838399,26838478-26838744,
26838832-26838909,26839019-26839120,26839251-26839300,
26839383-26839482,26839645-26839743,26839840-26839968,
26840319-26840427,26840652-26841055,26841140-26841280,
26841373-26841393
Length = 750
Score = 31.1 bits (67), Expect = 1.00
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -3
Query: 378 ISKYQGGAMPMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIH-FHTPNSNTLFDYVH 202
+ K P L+++++IN ++S K L KIH + N L + +
Sbjct: 356 LQKIDNDNYPETLRRMYIINAGQGFKMLWSTVKSFLDPKTASKIHVLGSKYQNKLLEIID 415
Query: 201 KDDLPKDLGG 172
+++LP+ GG
Sbjct: 416 ENELPEFFGG 425
>01_06_1519 +
37942389-37943702,37944142-37944266,37944358-37944499,
37944602-37944848,37946139-37946196,37947629-37947913,
37947988-37948120
Length = 767
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = -3
Query: 405 KYNSILGKTISKYQGGAMPMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIHFHTP-- 232
K+ ++ + ++ Q K++ IN P + P L K K F +P
Sbjct: 415 KHRAVTRQAVALLQDNYPEFIAKKVF-INVPWWYLAANKMMSPFLTQRTKSKFIFASPAK 473
Query: 231 NSNTLFDYVHKDDLPKDLGGI 169
++ TLF Y+ + +P GG+
Sbjct: 474 SAETLFRYIAPEQVPVQFGGL 494
>07_01_0609 +
4517467-4517529,4517627-4517701,4517914-4518030,
4518533-4518647,4519328-4519433,4519684-4519801,
4519905-4519972,4520697-4520830,4520932-4520975,
4521100-4521176,4521415-4521562,4522155-4522216,
4522373-4522472
Length = 408
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 309 IVDKIYSLFKPLLKSDVKEKIHFHT 235
++D +F P K+D KE+ HFHT
Sbjct: 33 LIDASPKMFTPATKADEKEETHFHT 57
>05_04_0395 -
20921606-20921869,20921971-20922112,20922206-20922330,
20922758-20923984
Length = 585
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = -3
Query: 405 KYNSILGKTISKYQGGAMPMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIHFHTP-- 232
K+ ++ + ++ Q K+I IN P + P L K KI F T
Sbjct: 386 KHRTVTRQALALLQDNYPEFIAKKIF-INVPWWYIAANKMVSPFLTQRTKSKIIFCTAAK 444
Query: 231 NSNTLFDYVHKDDLPKDLGGI 169
++ TLF Y+ + +P GG+
Sbjct: 445 SAETLFRYIAPEQVPVQFGGL 465
>05_04_0311 - 20120172-20122115
Length = 647
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = -3
Query: 159 LDIYTKKMKEMMLTKRDVLARDDLWRKNTAKPEADNAKSFRNL 31
LDI K++ ++ +KR +L DD+W + AK E +N +R +
Sbjct: 259 LDILQAKLEVLVRSKRFLLVLDDVW-NDEAKMELENKDLWRKV 300
>03_06_0603 +
34999083-34999703,35000092-35000177,35000400-35000796,
35000906-35001154,35001522-35001749,35002524-35002973,
35003848-35003961,35004171-35004216,35004408-35004574
Length = 785
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -3
Query: 276 LLKSDVKEKIHFHTPNSNTLFDYVHKDDLPKDLGGIRDSLD 154
LLK V+ K+H T S ++ + V +DLP +L IRD ++
Sbjct: 505 LLKYMVETKMHKDTFLSESILEEVIYEDLPSNLCAIRDYIE 545
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/79 (18%), Positives = 39/79 (49%)
Frame = -3
Query: 276 LLKSDVKEKIHFHTPNSNTLFDYVHKDDLPKDLGGIRDSLDIYTKKMKEMMLTKRDVLAR 97
L++++ K K+ N K+ L ++ ++ LD+ + + ++L K + ++
Sbjct: 1578 LVEANEKAKLQIQNFKENEALFLSEKERLLTEISSLKMLLDVKDQTYENLLLEKLEFVSS 1637
Query: 96 DDLWRKNTAKPEADNAKSF 40
D W K+ + A+ A+++
Sbjct: 1638 DVEWMKSKLQQFAELARTW 1656
>01_06_0403 -
29060712-29060732,29061260-29061334,29061596-29061762,
29061841-29061996,29062412-29062535,29062949-29063047,
29063155-29063254,29063331-29063380,29063461-29063562,
29063709-29063786,29063865-29064131,29064225-29064321,
29064446-29064746,29066714-29066805,29066890-29067005,
29067445-29067519,29067846-29067911,29068206-29068262,
29068381-29068430,29068518-29068688,29068969-29069060,
29069124-29069281
Length = 837
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = -3
Query: 378 ISKYQGGAMPMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIH-FHTPNSNTLFDYVH 202
+ K P L ++++IN ++ K L KIH + N L + +
Sbjct: 530 LQKINNDNYPETLHRLYIINAGQGFKMLWGTIKSFLDPQTASKIHVLGSKYQNKLLETID 589
Query: 201 KDDLPKDLGG 172
+ +LP LGG
Sbjct: 590 ESELPDFLGG 599
>05_04_0123 + 18210069-18213737
Length = 1222
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Frame = -3
Query: 276 LLKSDVKEKIHFHTP-----NSNTLFDYVHKDDLPKDLG---GIR-DSLDIYTKKMKEMM 124
L+ +DVK K HF + N + K + +G G++ D+L++ ++++E +
Sbjct: 205 LVFNDVKVKAHFQKHMWVCVSENFSVPVIVKGIIDTAIGNDCGLKFDNLELLQQRLREEL 264
Query: 123 LTKRDVLARDDLWRKNTAK 67
KR +L DD+W ++ K
Sbjct: 265 GQKRYLLVLDDVWNEDKQK 283
>07_03_0576 +
19638725-19638779,19638988-19639144,19639871-19640113,
19640267-19640801,19640897-19641054,19641194-19641626
Length = 526
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -3
Query: 294 YSLFKPLLKSDVKEKIHFHTPNSNTLFDYVHKDDLPKDLGGI-RDSLDIYTKKMKEMMLT 118
Y LF PLL+ +++ +TLF Y + D + I D LD + E+M T
Sbjct: 300 YPLFLPLLQQELQRYNQLRCLKPHTLFFYGNIQDAEQSCAMIYHDQLDNPQATVGELMCT 359
Query: 117 KRDVLARDDL 88
++ DL
Sbjct: 360 LEELYQGTDL 369
>07_01_1122 - 10359014-10359127,10359686-10359769,10360375-10361331
Length = 384
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 38 RKLFALSASGLAVFFLHRSSRART 109
R+L+A A GLA FLHRS T
Sbjct: 10 RRLWARGAEGLATMFLHRSELEET 33
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,017,722
Number of Sequences: 37544
Number of extensions: 343202
Number of successful extensions: 915
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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