Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b15r
         (677 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2GK12 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  

>UniRef50_Q2GK12 Cluster: Putative uncharacterized protein; n=1;
           Anaplasma phagocytophilum HZ|Rep: Putative
           uncharacterized protein - Anaplasma phagocytophilum
           (strain HZ)
          Length = 589

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = -3

Query: 558 VLVKIFDLCSVPILLMY*KYSQKFLMH--FSYIFADGNFIVINN-QVLQTFS*HLHNFLL 388
           +++  F L S+  +  + KY+  +L     +++   GN  ++N  +   T+S HL+NFL+
Sbjct: 42  IILSCFVLSSIICVASFIKYASNYLQDKKTAFVIEVGNSDILNELKNALTYSSHLNNFLI 101

Query: 387 PIGTVKR 367
            IG  +R
Sbjct: 102 SIGGEER 108


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,094,519
Number of Sequences: 1657284
Number of extensions: 10667558
Number of successful extensions: 19829
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 18804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19794
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)