Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b15r
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   3.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   5.1  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.9  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 68  DRLELGVLQKMPDLMIINKFGYLKTNEQTH 157
           D  E+G +Q  P ++    +G +  + QTH
Sbjct: 172 DGNEIGTIQHHPSMVASGAYGTMSMHPQTH 201


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 570 IYCYVLVKIFDLCSVPILLMY*KYSQKFLMHF 475
           IYC+V     +  SVP+ +    +   FL+HF
Sbjct: 35  IYCFVSPSCLECSSVPLFI---NFIFMFLLHF 63


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +3

Query: 609  YNY*YLLKIYYVFYIISLKYFL 674
            +N+  ++  YY+ YII + +F+
Sbjct: 1092 HNFRPIVAAYYIIYIIIIAFFM 1113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,680
Number of Sequences: 2352
Number of extensions: 10645
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)