Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b15f
         (657 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47070-1|CAA87340.1|  516|Caenorhabditis elegans Hypothetical pr...    32   0.41 
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n...    30   1.7  
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U88170-10|AAB42242.2|  340|Caenorhabditis elegans Serpentine rec...    29   3.8  
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z47070-1|CAA87340.1|  516|Caenorhabditis elegans Hypothetical
           protein T09B9.2 protein.
          Length = 516

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = -3

Query: 295 NSIWLIVFLCLLQYRLTLH-PALHHSVYLLAFASQILLCCV*HLAFPLIPSNECLLLSMV 119
           ++IW I+ LCL      LH P +  ++  LA A   ++  +             LL+S +
Sbjct: 375 HAIWAIIILCLANAFAGLHTPGVLTAIVQLAPAFSGIITGLAFAVASCFSIFNKLLISQI 434

Query: 118 VRTTPKYLWPVSYKSSRHSNLLSRYF 41
           +RT  K+ W + ++ S    +L   F
Sbjct: 435 LRTGSKHEWTIVFEISAFVAILPTIF 460


>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 62
           protein.
          Length = 1256

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
 Frame = +1

Query: 13  NPTIDRNTMENT-EKADLNDAKTC-NLLAKGILELYEPPLTTINTHLKELTEKQDAIHNT 186
           +P +     E+T E A+L D +T  NLL+   L   E  LT     + EL +     H+T
Sbjct: 736 SPVVVSAVAESTSESAELMDLETMQNLLSPATLRAREDLLTQQQAKINELVKLIQKNHDT 795

Query: 187 IKFERQKL 210
           ++ ++Q++
Sbjct: 796 LREQQQQI 803


>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/66 (24%), Positives = 28/66 (42%)
 Frame = +1

Query: 160  EKQDAIHNTIKFERQKLEDIQNXXXXXXXXXXIATNREKLLTISNSMMVLHKRVQSLQVR 339
            E  D +HN+  F +Q+++ I            I T  EKL  +S    +  K+ + ++  
Sbjct: 2062 EVLDELHNSELFSKQQIDQIMKVLDDLSDFKMINTRAEKLKMVSTITKLAKKKREEVRKT 2121

Query: 340  AANVEK 357
                EK
Sbjct: 2122 MTKYEK 2127


>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
            B0365.7 protein.
          Length = 2769

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/66 (24%), Positives = 28/66 (42%)
 Frame = +1

Query: 160  EKQDAIHNTIKFERQKLEDIQNXXXXXXXXXXIATNREKLLTISNSMMVLHKRVQSLQVR 339
            E  D +HN+  F +Q+++ I            I T  EKL  +S    +  K+ + ++  
Sbjct: 2062 EVLDELHNSELFSKQQIDQIMKVLDDLSDFKMINTRAEKLKMVSTITKLAKKKREEVRKT 2121

Query: 340  AANVEK 357
                EK
Sbjct: 2122 MTKYEK 2127


>U88170-10|AAB42242.2|  340|Caenorhabditis elegans Serpentine
           receptor, class h protein50 protein.
          Length = 340

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = -1

Query: 198 LKFYCVVYSILLFR*FLQMSVYCCQWWFVQLQNTFGQ*VTSLRV--IQI-CFLGIFHCVP 28
           L FYC+++    +    +  ++  Q+WF+ L   +    T  +    Q+ C++G+F  + 
Sbjct: 42  LGFYCIIFHSPKYMTTFKWHLFHLQFWFLMLTTFYSLLTTPFQFYPAQVRCYIGLFKYLD 101

Query: 27  IYSR 16
           I S+
Sbjct: 102 ISSQ 105


>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical
           protein W06A7.3f protein.
          Length = 2488

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 115 EPPLTTINTHLKELTEKQDAIHNTIKFER 201
           E  +T +  HL E  EKQ+ + ++IK E+
Sbjct: 98  ETTVTQLEDHLSETEEKQNEVESSIKSEK 126


>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical
           protein W06A7.3c protein.
          Length = 2484

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 115 EPPLTTINTHLKELTEKQDAIHNTIKFER 201
           E  +T +  HL E  EKQ+ + ++IK E+
Sbjct: 98  ETTVTQLEDHLSETEEKQNEVESSIKSEK 126


>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical
           protein W06A7.3a protein.
          Length = 2607

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 115 EPPLTTINTHLKELTEKQDAIHNTIKFER 201
           E  +T +  HL E  EKQ+ + ++IK E+
Sbjct: 98  ETTVTQLEDHLSETEEKQNEVESSIKSEK 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,929,243
Number of Sequences: 27780
Number of extensions: 308392
Number of successful extensions: 711
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)