Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b15f
         (657 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    22   4.5  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   4.5  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           22   4.5  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   5.9  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   7.8  

>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
          protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 40 ENTEKADLNDAKTCNLLA 93
          EN E+AD +   TC+LL+
Sbjct: 33 ENEERADRHRRVTCDLLS 50


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
          precursor protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 40 ENTEKADLNDAKTCNLLA 93
          EN E+AD +   TC+LL+
Sbjct: 33 ENEERADRHRRVTCDLLS 50


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 40 ENTEKADLNDAKTCNLLA 93
          EN E+AD +   TC+LL+
Sbjct: 8  ENEERADRHRRVTCDLLS 25


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 319 LFYVVPSLNSIWLIVFLCLLQYRL 248
           LFY V  +    LI FLC+L + L
Sbjct: 234 LFYTVNLILPTVLISFLCVLVFYL 257


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 642 PMA*LYYSLYPYISRWVAH 586
           P A    S+YPY+S   AH
Sbjct: 80  PAARTTSSMYPYVSAAAAH 98


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,965
Number of Sequences: 438
Number of extensions: 3750
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)