Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b13r
         (767 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC107874-1|AAI07875.1|  327|Homo sapiens coenzyme Q5 homolog, me...   120   8e-27
AK222610-1|BAD96330.1|  327|Homo sapiens hypothetical protein MG...   120   8e-27
BC004916-1|AAH04916.2|  325|Homo sapiens COQ5 protein protein.        116   7e-26
BC021978-1|AAH21978.1|  472|Homo sapiens FBXO46 protein protein.       33   0.85 

>BC107874-1|AAI07875.1|  327|Homo sapiens coenzyme Q5 homolog,
           methyltransferase (S. cerevisiae) protein.
          Length = 327

 Score =  120 bits (288), Expect = 8e-27
 Identities = 54/81 (66%), Positives = 66/81 (81%)
 Frame = -2

Query: 256 YRYIN*LRVPRAYDQYSFQVIPVLGQLVAGQWKPYQYLVESIRQFPNQEKFKMMIEDAGF 77
           +  +N   + R YD YSFQVIPVLG+++AG WK YQYLVESIR+FP+QE+FK MIEDAGF
Sbjct: 247 FSQVNNPLISRLYDLYSFQVIPVLGEVIAGDWKSYQYLVESIRRFPSQEEFKDMIEDAGF 306

Query: 76  RQVAYENLTFGTVAIHSGFKI 14
            +V YE+LT G VAIHSGFK+
Sbjct: 307 HKVTYESLTSGIVAIHSGFKL 327


>AK222610-1|BAD96330.1|  327|Homo sapiens hypothetical protein
           MGC4767 variant protein.
          Length = 327

 Score =  120 bits (288), Expect = 8e-27
 Identities = 54/81 (66%), Positives = 66/81 (81%)
 Frame = -2

Query: 256 YRYIN*LRVPRAYDQYSFQVIPVLGQLVAGQWKPYQYLVESIRQFPNQEKFKMMIEDAGF 77
           +  +N   + R YD YSFQVIPVLG+++AG WK YQYLVESIR+FP+QE+FK MIEDAGF
Sbjct: 247 FSQVNNPLISRLYDLYSFQVIPVLGEVIAGDWKSYQYLVESIRRFPSQEEFKDMIEDAGF 306

Query: 76  RQVAYENLTFGTVAIHSGFKI 14
            +V YE+LT G VAIHSGFK+
Sbjct: 307 HKVTYESLTSGIVAIHSGFKL 327


>BC004916-1|AAH04916.2|  325|Homo sapiens COQ5 protein protein.
          Length = 325

 Score =  116 bits (280), Expect = 7e-26
 Identities = 53/81 (65%), Positives = 65/81 (80%)
 Frame = -2

Query: 256 YRYIN*LRVPRAYDQYSFQVIPVLGQLVAGQWKPYQYLVESIRQFPNQEKFKMMIEDAGF 77
           +  +N   + R YD YSFQVIPVLG+++AG WK YQYLVESIR+ P+QE+FK MIEDAGF
Sbjct: 245 FSQVNNPLISRLYDLYSFQVIPVLGEVIAGDWKSYQYLVESIRRSPSQEEFKDMIEDAGF 304

Query: 76  RQVAYENLTFGTVAIHSGFKI 14
            +V YE+LT G VAIHSGFK+
Sbjct: 305 HKVTYESLTSGIVAIHSGFKL 325


>BC021978-1|AAH21978.1|  472|Homo sapiens FBXO46 protein protein.
          Length = 472

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +1

Query: 136 SRRGTGTASTGRPPADPTPGSLGTSTGRMP 225
           S RG G  S  RPP    PGS G+  GR+P
Sbjct: 430 STRGRGGESPPRPPLPSPPGSRGSGLGRLP 459


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,280,816
Number of Sequences: 237096
Number of extensions: 2139894
Number of successful extensions: 5591
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5591
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)