Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b13r
         (767 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L14429-7|AAK93871.1|  285|Caenorhabditis elegans Coenzyme q (ubi...    93   2e-19
U42439-7|AAA83511.1|  304|Caenorhabditis elegans Collagen protei...    30   2.1  
AC006697-1|AAF60390.2|  278|Caenorhabditis elegans Hypothetical ...    30   2.1  
U41268-5|AAA82438.1|  349|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z68121-3|CAA92205.1|  134|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z68119-9|CAA92198.1|  134|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U39742-7|AAK39197.2|  967|Caenorhabditis elegans Drosophila disc...    29   3.6  
AJ295228-1|CAC35153.1|  967|Caenorhabditis elegans MAGUK protein...    29   3.6  
AF406786-1|AAL01376.1|  967|Caenorhabditis elegans SAP97-like pr...    29   3.6  
Z81088-11|CAB03132.1|  339|Caenorhabditis elegans Hypothetical p...    28   6.4  
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical...    28   6.4  
AF125963-1|AAD14742.1|  339|Caenorhabditis elegans Serpentine re...    28   6.4  
AF077537-8|AAC26277.1|  226|Caenorhabditis elegans Hypothetical ...    28   6.4  
AC024696-11|AAK84510.1|  401|Caenorhabditis elegans Hypothetical...    28   6.4  
Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical pr...    28   8.4  
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    28   8.4  

>L14429-7|AAK93871.1|  285|Caenorhabditis elegans Coenzyme q
           (ubiquinone) biosynthesisprotein 5 protein.
          Length = 285

 Score = 93.1 bits (221), Expect = 2e-19
 Identities = 41/68 (60%), Positives = 50/68 (73%)
 Frame = -2

Query: 220 YDQYSFQVIPVLGQLVAGQWKPYQYLVESIRQFPNQEKFKMMIEDAGFRQVAYENLTFGT 41
           YD YSF VIPVLG+++A     YQYLVESIR+FPNQ++F  +I + GF  V YENLTFG 
Sbjct: 215 YDAYSFNVIPVLGEILASDRASYQYLVESIRKFPNQDEFARIIREEGFSNVRYENLTFGV 274

Query: 40  VAIHSGFK 17
            +IH G K
Sbjct: 275 CSIHKGMK 282


>U42439-7|AAA83511.1|  304|Caenorhabditis elegans Collagen protein
           110 protein.
          Length = 304

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 149 LVRLPLAGHQLTQHRDHLERVLVVCPGDAQLIY 247
           +V LPLA H + Q R+ LER  V C    + IY
Sbjct: 30  MVTLPLAYHYVNQLRNSLERQFVECNDVVRTIY 62


>AC006697-1|AAF60390.2|  278|Caenorhabditis elegans Hypothetical
           protein W09B7.3 protein.
          Length = 278

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -1

Query: 560 LYGWQQSVYASCIPDETPPPLPGHK-VHSNFYFFYNKQLFFLSLFLFIDPTI 408
           L+ WQ SV+    P     P   HK ++  F+  +  ++FFL L L +  T+
Sbjct: 7   LFFWQDSVFGQLFPHLNFNPYKSHKTIYFTFFCNFYFEMFFL-LILLVRSTV 57


>U41268-5|AAA82438.1|  349|Caenorhabditis elegans Hypothetical
           protein T14G12.6 protein.
          Length = 349

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 338 FYLQRNSL*VFLTFDLSIVMTMCC 267
           FYL+ N+L +FLT    +V+T CC
Sbjct: 137 FYLKMNTLSLFLTIPYLMVVTECC 160


>Z68121-3|CAA92205.1|  134|Caenorhabditis elegans Hypothetical
           protein T18D3.8 protein.
          Length = 134

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -2

Query: 205 FQVIPVLGQLVAGQWK----PYQYLVESIRQFPNQEKFKMMI 92
           FQV+PV G+   G+WK     +   +     +P ++++KM++
Sbjct: 27  FQVVPVPGEFTRGRWKVIDTRFGSAMGEFGNYPPEDEYKMIV 68


>Z68119-9|CAA92198.1|  134|Caenorhabditis elegans Hypothetical
           protein T18D3.8 protein.
          Length = 134

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -2

Query: 205 FQVIPVLGQLVAGQWK----PYQYLVESIRQFPNQEKFKMMI 92
           FQV+PV G+   G+WK     +   +     +P ++++KM++
Sbjct: 27  FQVVPVPGEFTRGRWKVIDTRFGSAMGEFGNYPPEDEYKMIV 68


>U39742-7|AAK39197.2|  967|Caenorhabditis elegans Drosophila discs
           large homologprotein 1, isoform a protein.
          Length = 967

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 563 DLYGWQQSVYASCIPDETPPPLPGHKVHSNFYFFYNK 453
           +L     S ++SC+P  + PP  G +V+   Y+F NK
Sbjct: 785 ELVNRDPSKFSSCVPHTSRPPREG-EVNGRDYYFVNK 820


>AJ295228-1|CAC35153.1|  967|Caenorhabditis elegans MAGUK protein
           DLG-1 protein.
          Length = 967

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 563 DLYGWQQSVYASCIPDETPPPLPGHKVHSNFYFFYNK 453
           +L     S ++SC+P  + PP  G +V+   Y+F NK
Sbjct: 785 ELVNRDPSKFSSCVPHTSRPPREG-EVNGRDYYFVNK 820


>AF406786-1|AAL01376.1|  967|Caenorhabditis elegans SAP97-like
           protein DLG-1 protein.
          Length = 967

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 563 DLYGWQQSVYASCIPDETPPPLPGHKVHSNFYFFYNK 453
           +L     S ++SC+P  + PP  G +V+   Y+F NK
Sbjct: 785 ELVNRDPSKFSSCVPHTSRPPREG-EVNGRDYYFVNK 820


>Z81088-11|CAB03132.1|  339|Caenorhabditis elegans Hypothetical
           protein F53F1.11 protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 212 LVVCPGDAQLIYISIGAAHSTLSLQC 289
           LV  PG+A+L+YI  G    T SL C
Sbjct: 63  LVAVPGEAKLVYIFNGPCKYTGSLSC 88


>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
            F36H2.3 protein.
          Length = 1388

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = +1

Query: 133  CSRRGTGTASTGRPPADPTPGSLGTSTGRM-PWGRATNLYIYRSSAQHIVITML 291
            C+  GTGT     PP  P   +L  S+G   PW   +   +   + Q ++ T +
Sbjct: 1245 CTSSGTGTGPCYTPPLTPVGATLTYSSGYFAPWTAGSTATMSCPAGQTVIGTSI 1298


>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
            protein Y66D12A.14 protein.
          Length = 2870

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
 Frame = +2

Query: 35   GHGSEREVFVGHLSESCVFYHHLEFLLIRKLPDALDEVLVRLPLAGHQLTQHRDHLERVL 214
            GH       + HLS+       L+ +   + P+AL++ L R  +   +  + R+ LE+  
Sbjct: 1666 GHSLTAMRLIDHLSDLLEVEIPLKLIFEHRTPEALEKALTRSEVVEEREDERREELEKFK 1725

Query: 215  VVCP---GDAQLIYIS 253
               P      Q+ Y+S
Sbjct: 1726 FKFPLSRQQLQMFYLS 1741


>AF125963-1|AAD14742.1|  339|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 20 protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 200 LERVLVVCPGDAQLIYISIGAAHSTLSLQC 289
           L+  L+  PG+A+LIYI  G    T SL C
Sbjct: 59  LQTRLMAVPGEAKLIYIFNGPCKYTGSLSC 88


>AF077537-8|AAC26277.1|  226|Caenorhabditis elegans Hypothetical
           protein F16G10.9 protein.
          Length = 226

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = -1

Query: 338 FYLQRNSL*VFLTFDLSIVMTMCCALLL*IYKLVARPQGIRPVLVPSDPGVGS 180
           FYL+ N L +FLT    +V T CC  ++     V  P  + PV     PGV +
Sbjct: 14  FYLKMNFLTLFLTIQCLMVGTECCMRMV-PPDDVYIPSTLAPVESTMAPGVST 65


>AC024696-11|AAK84510.1|  401|Caenorhabditis elegans Hypothetical
           protein F07B7.14 protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = -1

Query: 551 WQQSVYASCIPDETPPPLPGHK-VHSNFYFFYNKQLFFLSLFLFIDPTI 408
           WQ SV+    P     P   HK ++  F+  +  ++FFL L L +  T+
Sbjct: 133 WQDSVFGQLFPHLNFNPYKSHKTIYFTFFCNFYFEMFFL-LILLVRSTV 180


>Z66562-6|CAA91463.1| 1266|Caenorhabditis elegans Hypothetical
           protein F42E11.1 protein.
          Length = 1266

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +3

Query: 129 LMLSTRYWYGFHWPATS*PNTGITWNEYWSYALGTR 236
           ++++  +WYG    +     +G T+  +W+  LGTR
Sbjct: 290 VLMAGAFWYGAILTSYGVATSGTTFGVFWAVILGTR 325


>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
            protein Y40C5A.3 protein.
          Length = 2344

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = +1

Query: 496  GRGGGVSSGMQLA*TLCCQPYKSHNSKVKKLELNNKVRTDL 618
            G GGG SS        CCQP  S  S     +LNN+V   L
Sbjct: 2157 GGGGGCSSS-------CCQPQTSATSHAAHNKLNNRVAVPL 2190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,438,012
Number of Sequences: 27780
Number of extensions: 325399
Number of successful extensions: 1055
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)