Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b11r
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    27   0.12 
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    24   1.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.6  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   4.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.9  

>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = -2

Query: 335 WAELPPVTISAKLYNVQLSPDAEMNSIVKVYTDVLLDKGPFHTKIIEYENDIP 177
           W+E      + K  N+ L    +   ++K Y D LL+KG      +E + ++P
Sbjct: 18  WSEDTTHKYTTKYDNIDLENVVKNERLLKSYVDCLLEKGRCSPDGLELKKNMP 70


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -2

Query: 293 NVQLSPDAEMNSIVKVYTDVLLDKGPFHTKIIEYENDIP 177
           N+ +    + + + K Y D +L+KG    +  E + DIP
Sbjct: 26  NIDIDEILKNDRLTKNYLDCILEKGKCTPEGEELKKDIP 64


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 515  PLNGIYENKACIAIFPEDNLWYRASILQYSSTQN 414
            P   ++EN      F EDN  +R + LQ     N
Sbjct: 1515 PAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNN 1548


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 515  PLNGIYENKACIAIFPEDNLWYRASILQYSSTQN 414
            P   ++EN      F EDN  +R + LQ     N
Sbjct: 1515 PAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNN 1548


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 515  PLNGIYENKACIAIFPEDNLWYRASILQYSSTQN 414
            P   ++EN      F EDN  +R + LQ     N
Sbjct: 1515 PAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNN 1548


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 515  PLNGIYENKACIAIFPEDNLWYRASILQYSSTQN 414
            P   ++EN      F EDN  +R + LQ     N
Sbjct: 1515 PAKDVFENGHVNKAFEEDNYDHRRNSLQMQQRNN 1548


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2

Query: 293 NVQLSPDAEMNSIVKVYTDVLLDKGPFHTKIIEYENDIP 177
           N+ L    + + + + Y D +L KG    +  E + DIP
Sbjct: 27  NIDLDEILKNDRLTRNYIDCILGKGKCTPEGEELKRDIP 65


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 78  LFYFFYQKLAFC 43
           ++YF+Y  L FC
Sbjct: 258 IYYFYYMHLLFC 269


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 330 CPFIFDLSNICRGDYFY 380
           C  +   SNI  GD FY
Sbjct: 386 CAMVDSCSNILTGDQFY 402


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = -2

Query: 167 LRNDNNVLINKMLTKNTAFLEASAFSDN*VYFIFFI 60
           LRND  ++ N +   N        F    +Y+ F+I
Sbjct: 150 LRNDFRLMSNNLNKNNVVATGRFTFHKKNLYYSFYI 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,062
Number of Sequences: 336
Number of extensions: 3723
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)