Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b11r
         (747 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    25   1.00 
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    25   1.00 
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              24   1.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   5.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   5.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   7.0  

>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = -2

Query: 308 SAKLYNVQLSPDAEMNSIVKVYTDVLLDKGPFHTKIIEYENDIP 177
           + K  NV +        ++  Y + LLD+GP      E + ++P
Sbjct: 25  TTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTPDAAELKRNLP 68


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = -2

Query: 308 SAKLYNVQLSPDAEMNSIVKVYTDVLLDKGPFHTKIIEYENDIP 177
           + K  NV +        ++  Y + LLD+GP      E + ++P
Sbjct: 25  TTKYDNVDIDVVLNTERLLNAYVNCLLDQGPCTPDAAELKRNLP 68


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 559 LYCEVVLSSCNILSSN 606
           LYCE +L + NIL  N
Sbjct: 61  LYCECILKNFNILDKN 76


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 313  VTGGNSAHSSLISLTSAGEIT 375
            V G N A  + ++LT  GE++
Sbjct: 1577 VAGSNQAEFTFVTLTKEGELS 1597


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 313  VTGGNSAHSSLISLTSAGEIT 375
            V G N A  + ++LT  GE++
Sbjct: 1573 VAGSNQAEFTFVTLTKEGELS 1593


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 640 DVIFLLLTIRTYWNLVYY 587
           DV+ ++ TI TY + V+Y
Sbjct: 320 DVLIIIYTILTYMSGVFY 337


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,456
Number of Sequences: 438
Number of extensions: 4662
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)