Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b11f
         (604 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.76 
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   4.0  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   4.0  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   5.3  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   9.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   9.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.3  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 419 LFLECGHTVCENCIRNIVKFHEPIECRICQKCMEIDSSESC 541
           L +EC   + E  +  +++ +EPIECR        D   SC
Sbjct: 150 LIIECSLNL-ETYLDKLIEKNEPIECRELTARFTTDVIGSC 189


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = -1

Query: 388 YLKLIRLAAIGTTFFCF*IYGFHFYNFEDFSNYFRLL*GKHFTNSQQINFLMFYLTK*KC 209
           +L  I L  I    + F I   +  NF + S  ++ +   +F NS+  +F+ F     +C
Sbjct: 87  FLLFILLVQIAVAVYAF-IVVKNDDNFRNISEKYQEIFNGYFLNSESKDFIDFIQKNLQC 145


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 339 KQKNVVPIAANLINFKYFQL 398
           K KN+ PI  +L+   YF++
Sbjct: 171 KDKNMAPILKDLMETSYFKV 190


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 491 ECRICQKCMEIDSSESCLLV 550
           +C +CQ+  E   + SCL V
Sbjct: 273 KCSLCQRRFEEQGNYSCLKV 292


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 123 LIKT*NSNTLFLNRPMRAD 179
           L+K  N N  FL RP+  D
Sbjct: 14  LLKKRNENDPFLKRPITGD 32


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 376 SISNTFNYIKDQLTIVPGMWSHCL 447
           +IS+  N+  D    V G+W +CL
Sbjct: 573 NISHFINHSCDPNLAVYGVWINCL 596


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 396 LYQRSTYHCSWNVVTLFVKIVLETLSSFTNRL 491
           LY+R  +   W +VTL V  ++  +    N L
Sbjct: 54  LYERVEWSGPWILVTLIVLAIVNVMVVLGNVL 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,434
Number of Sequences: 438
Number of extensions: 3153
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)