Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b08f
         (627 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0V3T1 Cluster: Predicted protein; n=1; Phaeosphaeria n...    34   2.4  
UniRef50_P25733 Cluster: CFA/I fimbrial subunit C precursor; n=9...    34   2.4  
UniRef50_Q4WTA1 Cluster: Putative uncharacterized protein; n=2; ...    33   7.4  
UniRef50_A6GJ43 Cluster: Putative uncharacterized protein; n=1; ...    32   9.8  

>UniRef50_Q0V3T1 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 220

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = -2

Query: 617 NAAAPGRRCCHAHQPRSACWVTRLGGQ---HLQRMRCSSTALSAVHI 486
           +AA PG RC HA  PRS  +V R  G+   HL R+ C  +     H+
Sbjct: 129 SAAVPGCRCWHAELPRS-LFVRRAEGRPPGHLSRVACLKSMFPRCHV 174


>UniRef50_P25733 Cluster: CFA/I fimbrial subunit C precursor; n=9;
           Escherichia coli|Rep: CFA/I fimbrial subunit C precursor
           - Escherichia coli
          Length = 869

 Score = 34.3 bits (75), Expect = 2.4
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -3

Query: 475 GFYSERESFIHGYLNQMFSG-HHEVGI*YNKEREN 374
           G YS  E F+ GY+    +G +HE G+ +NK R N
Sbjct: 584 GNYSSNELFVDGYMTSTNNGDYHEAGMRFNKNRHN 618


>UniRef50_Q4WTA1 Cluster: Putative uncharacterized protein; n=2;
           Trichocomaceae|Rep: Putative uncharacterized protein -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 483

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = +1

Query: 4   WLAAARHARSSSKFINFINARIY*RTTETHFSGGLEQMI--RSTCSTFGLR-EDRLQLSR 174
           W  AARHAR++ +   +   R+Y RT +     GLE  +        FGL     LQ+SR
Sbjct: 230 WDPAARHARNNKRTDEYRGTRMYQRTVKIWTQDGLESEVSRHPHRQFFGLEFSYSLQISR 289

Query: 175 G 177
           G
Sbjct: 290 G 290


>UniRef50_A6GJ43 Cluster: Putative uncharacterized protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 266

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -2

Query: 614 AAAPGRRCCHAHQPRSACWVTRLG--GQHLQRMRCSSTALSAV 492
           A APG RC + H P S  W    G  G+ L+RM   +  + A+
Sbjct: 191 ALAPGERCLYHHLPHSTPWPRAHGQAGEELERMDTPTRTVLAI 233


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,269,371
Number of Sequences: 1657284
Number of extensions: 11864733
Number of successful extensions: 27007
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27007
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)