Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b06r
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    25   0.83 
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    24   1.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.1  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.5  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   2.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.8  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -1

Query: 389 VRASVRGARTFRCI 348
           +R  ++GARTFRC+
Sbjct: 35  LREGLKGARTFRCV 48


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 423 TRARHLYHHIATHTGRLPF 479
           TR  HL  H+  HTG  P+
Sbjct: 20  TRDHHLKTHMRLHTGERPY 38


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 426 RARHLYHHIATHTGRLPFV 482
           +  HL  H+  HTG  PFV
Sbjct: 328 KTSHLKAHLRWHTGERPFV 346


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 423 TRARHLYHHIATHTGRLPF 479
           TR  HL  H+  HTG  P+
Sbjct: 173 TRDHHLKTHMRLHTGERPY 191


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 420 APNLYLCICVRACLCARRP 364
           A N   C C+R C  A+RP
Sbjct: 184 ASNGNKCCCLRTCSSAKRP 202


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +3

Query: 435 HLYHHIATHTGRLPFVPLQLNFSYIVK--LTEYFKS 536
           HL +H+  H G  PF   + +++ + K  L  + KS
Sbjct: 245 HLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKS 280


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +3

Query: 435 HLYHHIATHTGRLPFVPLQLNFSYIVK--LTEYFKS 536
           HL +H+  H G  PF   + +++ + K  L  + KS
Sbjct: 3   HLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKS 38


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 425 CRLLTYICVYVCVRASVRGARTFRCIHYIY 336
           C L+  +C+Y   RA +     F C   +Y
Sbjct: 290 CALIILLCIYYFCRAFIIFPTHFYCAFSLY 319


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 136 CVNDLIKYYYIS 101
           C+N LI YY+IS
Sbjct: 391 CLNTLIFYYHIS 402


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,338
Number of Sequences: 336
Number of extensions: 3368
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)