Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b06r
         (725 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    27   0.78 
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   7.3  
AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    23   9.6  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -1

Query: 389 VRASVRGARTFRCIHYI 339
           +R  +RGARTFRC+  I
Sbjct: 22  LREGLRGARTFRCVFII 38


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 438 LYHHIATHTGRLPF 479
           L  HI THTG  PF
Sbjct: 227 LKRHIRTHTGEKPF 240


>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 429 ARHLYHHIATHTGRL 473
           A  L  H+ATHTG++
Sbjct: 157 AERLGQHVATHTGQM 171


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,441
Number of Sequences: 2352
Number of extensions: 12575
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)