Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10b04r
(707 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5Y5 Cluster: Ribosomal protein S33; n=4; Endopterygo... 224 2e-57
UniRef50_Q9Y291 Cluster: Mitochondrial 28S ribosomal protein S33... 109 7e-23
UniRef50_Q6L5P4 Cluster: Mitochondrial ribosomal protein S33; n=... 101 2e-20
UniRef50_Q19685 Cluster: Putative uncharacterized protein; n=2; ... 87 5e-16
UniRef50_Q5BST1 Cluster: SJCHGC03339 protein; n=1; Schistosoma j... 82 2e-14
UniRef50_A7SQA5 Cluster: Predicted protein; n=1; Nematostella ve... 79 1e-13
UniRef50_UPI0000E4A035 Cluster: PREDICTED: similar to LOC495310 ... 71 2e-11
UniRef50_Q4SRI4 Cluster: Chromosome undetermined SCAF14526, whol... 47 5e-04
UniRef50_UPI0000F2CE70 Cluster: PREDICTED: similar to Transmembr... 35 1.7
UniRef50_Q3LWB4 Cluster: Thylakoid preprotein translocase; n=1; ... 35 2.3
UniRef50_UPI0000498391 Cluster: hypothetical protein 2.t00120; n... 33 9.1
UniRef50_Q73F23 Cluster: Tn7-like transposition protein C; n=1; ... 33 9.1
>UniRef50_Q2F5Y5 Cluster: Ribosomal protein S33; n=4;
Endopterygota|Rep: Ribosomal protein S33 - Bombyx mori
(Silk moth)
Length = 118
Score = 224 bits (547), Expect = 2e-57
Identities = 105/111 (94%), Positives = 106/111 (95%)
Frame = -1
Query: 659 MATNYTKYAQLINTSTTYARRMKRLSNRIFGEVALPTNSKSMKVVKIFSARPLHTNEEII 480
MATNYTKYAQLINTSTTYARRMKRLSN IFGEVALPTNSKSMKVVKIFSARPLHTNEEI+
Sbjct: 1 MATNYTKYAQLINTSTTYARRMKRLSNSIFGEVALPTNSKSMKVVKIFSARPLHTNEEIM 60
Query: 479 HYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGKVKVWRRLLD 327
HYYP HMETHKLMMNL DYGLFRDEHQDFKEEMK LRELRGKVKVW RLLD
Sbjct: 61 HYYPSHMETHKLMMNLSDYGLFRDEHQDFKEEMKSLRELRGKVKVWSRLLD 111
>UniRef50_Q9Y291 Cluster: Mitochondrial 28S ribosomal protein S33;
n=20; Coelomata|Rep: Mitochondrial 28S ribosomal protein
S33 - Homo sapiens (Human)
Length = 106
Score = 109 bits (262), Expect = 7e-23
Identities = 53/93 (56%), Positives = 66/93 (70%)
Frame = -1
Query: 626 INTSTTYARRMKRLSNRIFGEVALPTNSKSMKVVKIFSARPLHTNEEIIHYYPRHMETHK 447
+++ + YA RM RLS R+FGEV PTNSKSMKVVK+FS PL +E +YP H +
Sbjct: 1 MSSLSEYAFRMSRLSARLFGEVTRPTNSKSMKVVKLFSELPLAKKKETYDWYPNHHTYAE 60
Query: 446 LMMNLRDYGLFRDEHQDFKEEMKRLRELRGKVK 348
LM LR GL+RDEHQDF +E KRL++LRGK K
Sbjct: 61 LMQTLRFLGLYRDEHQDFMDEQKRLKKLRGKEK 93
>UniRef50_Q6L5P4 Cluster: Mitochondrial ribosomal protein S33; n=9;
Euteleostomi|Rep: Mitochondrial ribosomal protein S33 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 106
Score = 101 bits (242), Expect = 2e-20
Identities = 47/87 (54%), Positives = 63/87 (72%)
Frame = -1
Query: 614 TTYARRMKRLSNRIFGEVALPTNSKSMKVVKIFSARPLHTNEEIIHYYPRHMETHKLMMN 435
+ YA RM RLS RIFG+V+ T+++S+KVV++F PL +E+ +YP H + +
Sbjct: 5 SNYALRMARLSARIFGDVSRQTDARSLKVVELFKEPPLAQRKEVYDWYPPHKIYYSMTQR 64
Query: 434 LRDYGLFRDEHQDFKEEMKRLRELRGK 354
LR GLFRDEHQDFKEEM+RLR+LRGK
Sbjct: 65 LRYMGLFRDEHQDFKEEMRRLRKLRGK 91
>UniRef50_Q19685 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 126
Score = 86.6 bits (205), Expect = 5e-16
Identities = 42/93 (45%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Frame = -1
Query: 626 INTSTTYARRMKRLSNRIFGEVALPTNSKSMKVVKIFSARPLHTNEEII-HYYPRHMETH 450
I+ T + +RM RLSNR++GEV +PT++KS+KVV++ SA P T E++ YYP H
Sbjct: 17 ISQPTPFGKRMDRLSNRVWGEVVMPTDTKSLKVVRVMSAEPYETKEQLSPKYYPNLPMFH 76
Query: 449 KLMMNLRDYGLFRDEHQDFKEEMKRLRELRGKV 351
L LR +GLF D+H F++ L+ +RGKV
Sbjct: 77 YLTKMLRFHGLFFDDHVVFRDVQDNLKIIRGKV 109
>UniRef50_Q5BST1 Cluster: SJCHGC03339 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03339 protein - Schistosoma
japonicum (Blood fluke)
Length = 97
Score = 81.8 bits (193), Expect = 2e-14
Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Frame = -1
Query: 617 STTYARRMKRLSNRIFGEVALPTNSKSMKVVKIFSA--RPLHTNEEIIHYYPRHMETHKL 444
++ YA++M L+ RIF +V +SKSMKVV+I S RPL + YYP E +
Sbjct: 2 TSLYAKKMTLLAGRIFKDVGRQVDSKSMKVVRIMSELPRPLILKD----YYPALEEYSNI 57
Query: 443 MMNLRDYGLFRDEHQDFKEEMKRLRELRGKVK 348
M LR GL+RDEH DF+EEM+RLR LRGK K
Sbjct: 58 MQKLRYLGLYRDEHADFREEMERLRVLRGKGK 89
>UniRef50_A7SQA5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 100
Score = 78.6 bits (185), Expect = 1e-13
Identities = 42/88 (47%), Positives = 53/88 (60%)
Frame = -1
Query: 617 STTYARRMKRLSNRIFGEVALPTNSKSMKVVKIFSARPLHTNEEIIHYYPRHMETHKLMM 438
ST YAR+M L RIFG++ P +S KVV FS RPL I YYP + + L++
Sbjct: 2 STNYARKMALLQARIFGKLTRPVTKQSYKVVTHFSRRPL--GGAINSYYPPLKQFNSLLL 59
Query: 437 NLRDYGLFRDEHQDFKEEMKRLRELRGK 354
LR G +RD+H DFKEEM R+ RGK
Sbjct: 60 RLRHLGFYRDDHLDFKEEMAVRRKERGK 87
>UniRef50_UPI0000E4A035 Cluster: PREDICTED: similar to LOC495310
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC495310 protein -
Strongylocentrotus purpuratus
Length = 76
Score = 71.3 bits (167), Expect = 2e-11
Identities = 30/61 (49%), Positives = 44/61 (72%)
Frame = -1
Query: 536 MKVVKIFSARPLHTNEEIIHYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRG 357
MKVV++ P + I+ YYP HM++ KLM LR GL+RDEH DF++EMKR+++++G
Sbjct: 1 MKVVEMMREEPRQMRKHIVDYYPPHMQSFKLMGYLRYIGLYRDEHADFRDEMKRVQKMKG 60
Query: 356 K 354
K
Sbjct: 61 K 61
>UniRef50_Q4SRI4 Cluster: Chromosome undetermined SCAF14526, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14526,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 81
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = -1
Query: 614 TTYARRMKRLSNRIFGEVALPTNSKSMKVVKIFSARPLHTNEE 486
++YA RM RLS +IFGEV P +S+S+KVV++F PL +E
Sbjct: 5 SSYAVRMARLSAQIFGEVVNPADSRSLKVVQLFQELPLAKRKE 47
>UniRef50_UPI0000F2CE70 Cluster: PREDICTED: similar to Transmembrane
protease, serine 4; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to Transmembrane protease, serine 4 -
Monodelphis domestica
Length = 491
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = +1
Query: 526 TTFMDLELVGRATSPKILLDRRFIRRAY 609
TTFMDLE VG A SP I RR IR Y
Sbjct: 453 TTFMDLESVGTAISPNIRALRRAIRMVY 480
>UniRef50_Q3LWB4 Cluster: Thylakoid preprotein translocase; n=1;
Bigelowiella natans|Rep: Thylakoid preprotein
translocase - Bigelowiella natans (Pedinomonas
minutissima) (Chlorarachnion sp.(strain CCMP 621))
Length = 487
Score = 34.7 bits (76), Expect = 2.3
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = -1
Query: 260 SLFSNSLITTHYLHLMLIKYVIIVTLPYLIFNAHHIKCRGVFSNLISRTLFIS*L*SGML 81
S+ NS+ + Y L+ +VTL IF+ IK + L S+ FIS + SG+
Sbjct: 353 SINENSITSALYFSTYLLASTALVTLFNYIFSVQKIKLNELTEKLKSQNAFISGVRSGLQ 412
Query: 80 ESKAVN 63
K +N
Sbjct: 413 TKKTIN 418
>UniRef50_UPI0000498391 Cluster: hypothetical protein 2.t00120; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 2.t00120 - Entamoeba histolytica HM-1:IMSS
Length = 498
Score = 32.7 bits (71), Expect = 9.1
Identities = 12/60 (20%), Positives = 31/60 (51%)
Frame = -1
Query: 650 NYTKYAQLINTSTTYARRMKRLSNRIFGEVALPTNSKSMKVVKIFSARPLHTNEEIIHYY 471
N T + + T + + + + ++F EV+L T + +KV+ + + NE+++ ++
Sbjct: 266 NITSHCVSVPTKNVFQSLVDQKNTQVFWEVSLGTTTNDLKVITSIGNKTVEDNEQLVFHF 325
>UniRef50_Q73F23 Cluster: Tn7-like transposition protein C; n=1;
Bacillus cereus ATCC 10987|Rep: Tn7-like transposition
protein C - Bacillus cereus (strain ATCC 10987)
Length = 555
Score = 32.7 bits (71), Expect = 9.1
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -1
Query: 560 ALPTNSKSMKVVKIFSARPLHTNEEIIHYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEM 381
ALP +V+K + RPL+ EE YP H+ H + RD+ H + ++ +
Sbjct: 33 ALPEIYSETEVIKKLANRPLYKEEE--KTYPSHLRMHMVQRVYRDFFQPLSIHLEVEQRV 90
Query: 380 KRL 372
R+
Sbjct: 91 SRI 93
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,452,296
Number of Sequences: 1657284
Number of extensions: 11704254
Number of successful extensions: 24892
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 24190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24879
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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