BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV10b04f (615 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT016004-1|AAV36889.1| 113|Drosophila melanogaster RE39106p pro... 152 4e-37 AE014297-2204|AAF55312.1| 113|Drosophila melanogaster CG10406-P... 152 4e-37 AY061185-1|AAL28733.1| 274|Drosophila melanogaster LD15002p pro... 29 3.8 AF021259-1|AAB71892.1| 274|Drosophila melanogaster Pur-alpha pr... 29 3.8 AE014135-94|AAN06499.1| 260|Drosophila melanogaster CG1507-PD, ... 29 3.8 AE014135-93|AAN06498.1| 274|Drosophila melanogaster CG1507-PC, ... 29 3.8 AE014135-92|AAN06497.1| 274|Drosophila melanogaster CG1507-PA, ... 29 3.8 AE014135-91|AAF59337.2| 275|Drosophila melanogaster CG1507-PB, ... 29 3.8 U30492-1|AAC47078.1| 1231|Drosophila melanogaster Cap protein. 28 8.7 AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 28 8.7 AE014298-914|AAF46176.1| 438|Drosophila melanogaster CG14443-PA... 28 8.7 >BT016004-1|AAV36889.1| 113|Drosophila melanogaster RE39106p protein. Length = 113 Score = 152 bits (368), Expect = 4e-37 Identities = 69/96 (71%), Positives = 79/96 (82%) Frame = +1 Query: 67 KYAQLINTSTTYARRMKRLSNRIFGEVALPTNSKSMKVVKIFSARPLHTNEEIIHYYPRH 246 KY +LI T YARRM LSNRIFGEVA TN KSMKVV++FS P+H + +I++YPRH Sbjct: 4 KYTELIKVGTQYARRMNYLSNRIFGEVARTTNEKSMKVVRMFSEEPIHKRDYVINWYPRH 63 Query: 247 METHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGK 354 +ETH LM NLRDYGLFRDEHQDFKEEMKRLR+LRGK Sbjct: 64 VETHLLMKNLRDYGLFRDEHQDFKEEMKRLRKLRGK 99 >AE014297-2204|AAF55312.1| 113|Drosophila melanogaster CG10406-PA protein. Length = 113 Score = 152 bits (368), Expect = 4e-37 Identities = 69/96 (71%), Positives = 79/96 (82%) Frame = +1 Query: 67 KYAQLINTSTTYARRMKRLSNRIFGEVALPTNSKSMKVVKIFSARPLHTNEEIIHYYPRH 246 KY +LI T YARRM LSNRIFGEVA TN KSMKVV++FS P+H + +I++YPRH Sbjct: 4 KYTELIKVGTQYARRMNYLSNRIFGEVARTTNEKSMKVVRMFSEEPIHKRDYVINWYPRH 63 Query: 247 METHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGK 354 +ETH LM NLRDYGLFRDEHQDFKEEMKRLR+LRGK Sbjct: 64 VETHLLMKNLRDYGLFRDEHQDFKEEMKRLRKLRGK 99 >AY061185-1|AAL28733.1| 274|Drosophila melanogaster LD15002p protein. Length = 274 Score = 29.5 bits (63), Expect = 3.8 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 100 YARRMKRLSNRIFGEVALPTNSKSMK 177 Y +MK+ S+ I E+ LPT+S S+K Sbjct: 249 YCEKMKKSSDSITAEINLPTSSNSLK 274 >AF021259-1|AAB71892.1| 274|Drosophila melanogaster Pur-alpha protein. Length = 274 Score = 29.5 bits (63), Expect = 3.8 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 100 YARRMKRLSNRIFGEVALPTNSKSMK 177 Y +MK+ S+ I E+ LPT+S S+K Sbjct: 249 YCEKMKKSSDSITAEINLPTSSNSLK 274 >AE014135-94|AAN06499.1| 260|Drosophila melanogaster CG1507-PD, isoform D protein. Length = 260 Score = 29.5 bits (63), Expect = 3.8 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 100 YARRMKRLSNRIFGEVALPTNSKSMK 177 Y +MK+ S+ I E+ LPT+S S+K Sbjct: 235 YCEKMKKSSDSITAEINLPTSSNSLK 260 >AE014135-93|AAN06498.1| 274|Drosophila melanogaster CG1507-PC, isoform C protein. Length = 274 Score = 29.5 bits (63), Expect = 3.8 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 100 YARRMKRLSNRIFGEVALPTNSKSMK 177 Y +MK+ S+ I E+ LPT+S S+K Sbjct: 249 YCEKMKKSSDSITAEINLPTSSNSLK 274 >AE014135-92|AAN06497.1| 274|Drosophila melanogaster CG1507-PA, isoform A protein. Length = 274 Score = 29.5 bits (63), Expect = 3.8 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 100 YARRMKRLSNRIFGEVALPTNSKSMK 177 Y +MK+ S+ I E+ LPT+S S+K Sbjct: 249 YCEKMKKSSDSITAEINLPTSSNSLK 274 >AE014135-91|AAF59337.2| 275|Drosophila melanogaster CG1507-PB, isoform B protein. Length = 275 Score = 29.5 bits (63), Expect = 3.8 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = +1 Query: 100 YARRMKRLSNRIFGEVALPTNSKSMK 177 Y +MK+ S+ I E+ LPT+S S+K Sbjct: 250 YCEKMKKSSDSITAEINLPTSSNSLK 275 >U30492-1|AAC47078.1| 1231|Drosophila melanogaster Cap protein. Length = 1231 Score = 28.3 bits (60), Expect = 8.7 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = -1 Query: 261 FMRLHVSRIIVYNFLICVQRSSREDFDNLHGLGVGR*GN 145 + ++H+ +II+ F ++ E FD H + VGR G+ Sbjct: 29 YNKMHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGS 67 >AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed DNA polymerase protein. Length = 1065 Score = 28.3 bits (60), Expect = 8.7 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = +1 Query: 61 YTKYAQLINTSTTYARRMKRLSNRIFGEVALPTNSKSMK 177 Y+KYA LI S+ KR +IF E+ P+ K+ K Sbjct: 842 YSKYAALIEVSSRDWLEAKRALLKIFNEMGKPSEIKADK 880 >AE014298-914|AAF46176.1| 438|Drosophila melanogaster CG14443-PA protein. Length = 438 Score = 28.3 bits (60), Expect = 8.7 Identities = 10/25 (40%), Positives = 20/25 (80%) Frame = +1 Query: 70 YAQLINTSTTYARRMKRLSNRIFGE 144 +AQLI +ST+++ +KR++N+ G+ Sbjct: 208 HAQLIVSSTSWSSNLKRMANKFLGQ 232 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,203,324 Number of Sequences: 53049 Number of extensions: 498569 Number of successful extensions: 1217 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1183 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1217 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2517878700 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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