Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10b03f
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 45 3e-05
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 39 0.003
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 39 0.003
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 38 0.004
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical p... 36 0.015
Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical p... 36 0.015
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 36 0.027
Z92849-5|CAB07430.1| 163|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical pr... 31 0.58
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 30 1.0
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 30 1.3
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 30 1.3
AF036693-4|AAK29786.1| 360|Caenorhabditis elegans Hypothetical ... 29 1.8
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 29 2.3
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 29 2.3
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 29 2.3
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 29 2.3
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 29 2.3
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 2.3
Z93381-1|CAB07604.1| 509|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF039712-1|AAK21402.2| 239|Caenorhabditis elegans 2 (zwei) ig-d... 29 3.1
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 28 4.1
U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical p... 28 4.1
U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical pr... 28 4.1
U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical pr... 28 4.1
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 28 4.1
AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical ... 28 4.1
Z68315-6|CAA92671.1| 219|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical pr... 27 7.2
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 7.2
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 27 7.2
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 27 7.2
U41034-4|AAY43995.1| 385|Caenorhabditis elegans Hypothetical pr... 27 7.2
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 27 7.2
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 27 7.2
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 27 9.5
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 27 9.5
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 27 9.5
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/77 (36%), Positives = 37/77 (48%)
Frame = -2
Query: 335 RGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGPT 156
+ P+ P T+ P+T PT M S +T PT M S +T PT M + +T PT
Sbjct: 169 KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 228
Query: 155 EMGS*VSTRAGPTEMGS 105
M S +T PT M S
Sbjct: 229 TMKSTPTTPTTPTTMKS 245
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/77 (36%), Positives = 37/77 (48%)
Frame = -2
Query: 335 RGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGPT 156
+ P+ P T+ P+T PT M S +T PT M S +T PT M + +T PT
Sbjct: 283 KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT 342
Query: 155 EMGS*VSTRAGPTEMGS 105
M S +T PT M S
Sbjct: 343 TMKSTPTTPTTPTTMKS 359
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/78 (37%), Positives = 37/78 (47%)
Frame = -2
Query: 338 TRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGP 159
T P+ P T+ P+T PT M S +T PT M S +T PT M + +T P
Sbjct: 181 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 240
Query: 158 TEMGS*VSTRAGPTEMGS 105
T M S +T PT M S
Sbjct: 241 TTMKSTPTTPTTPTTMKS 258
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/78 (37%), Positives = 37/78 (47%)
Frame = -2
Query: 338 TRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGP 159
T P+ P T+ P+T PT M S +T PT M S +T PT M + +T P
Sbjct: 194 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 253
Query: 158 TEMGS*VSTRAGPTEMGS 105
T M S +T PT M S
Sbjct: 254 TTMKSTPTTPTTPTTMKS 271
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/78 (37%), Positives = 37/78 (47%)
Frame = -2
Query: 338 TRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGP 159
T P+ P T+ P+T PT M S +T PT M S +T PT M + +T P
Sbjct: 207 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 266
Query: 158 TEMGS*VSTRAGPTEMGS 105
T M S +T PT M S
Sbjct: 267 TTMKSTPTTPTTPTTMKS 284
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/78 (37%), Positives = 37/78 (47%)
Frame = -2
Query: 338 TRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGP 159
T P+ P T+ P+T PT M S +T PT M S +T PT M + +T P
Sbjct: 295 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 354
Query: 158 TEMGS*VSTRAGPTEMGS 105
T M S +T PT M S
Sbjct: 355 TTMKSTPTTPTTPTTMKS 372
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/78 (37%), Positives = 37/78 (47%)
Frame = -2
Query: 338 TRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGP 159
T P+ P T+ P+T PT M S +T PT M S +T PT M + +T P
Sbjct: 308 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 367
Query: 158 TEMGS*VSTRAGPTEMGS 105
T M S +T PT M S
Sbjct: 368 TTMKSTPTTPTTPTTMKS 385
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/78 (37%), Positives = 37/78 (47%)
Frame = -2
Query: 338 TRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VSTRAGPTEMGT*VSTRAGP 159
T P+ P T+ P+T PT M S +T PT M S +T PT M + +T P
Sbjct: 321 TPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 380
Query: 158 TEMGS*VSTRAGPTEMGS 105
T M S +T PT M S
Sbjct: 381 TTMKSTPTTPTTPTTMKS 398
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -2
Query: 335 RGVPSAPVTVTGAPSTMAGPTEMGS*VST----RAGPTEMGS*VSTRAGPTEMGT 183
+ P+ P T+ P+T PT M S +T ++ PT + S+ PT M T
Sbjct: 397 KSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPSTMKSSPTTPTTMKT 451
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 41.5 bits (93), Expect = 4e-04
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 13/158 (8%)
Frame = -1
Query: 543 DDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSG----ENNNFGQR------LFGNVLN 394
D G+NN G D++G + + G GSG +N+N+G +GN
Sbjct: 319 DQWGSNNNGGDNYGSELSNNWGGSNGGSGSNGGSGGGNTDNDNWGSNNGNSGGSWGN--G 376
Query: 393 INGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNN---GRSNRDGLVGVNKSRSDGDGL 223
G SG G D+D S G+ ++ N+ G +++G G N +R+DG G
Sbjct: 377 GTGGSGGSGGGNWGDNDNYGSSNKWNGNGNQDNDNDNFGGGYSKNG-YGSNNNRNDGWGS 435
Query: 222 VGVNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGDG 109
N + +N + + G SN G G N + + DG
Sbjct: 436 SSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNNGNDG 473
Score = 35.9 bits (79), Expect = 0.020
Identities = 34/137 (24%), Positives = 55/137 (40%)
Frame = -1
Query: 567 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNIN 388
G++D + D+ NN + ++ +G RN D Y NN N N
Sbjct: 155 GENDDWNNGDQNNNN---NFNSKNNRMNKYGNRN-DGDDYNGNGNNQDNWNSGSNSGGYN 210
Query: 387 GISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNK 208
G G G + ++ +E + +++R + NN +N G N +DG+ G
Sbjct: 211 GGGGGSGGGSNWNNGDNENDGWNNNNNNRKSNNNNNNNYGNSWGTND--NDGNSWKGSGN 268
Query: 207 SRSNRDGHVGVNKSRSN 157
S N D G + S SN
Sbjct: 269 SNGNSDNWGGSSGSGSN 285
Score = 35.5 bits (78), Expect = 0.027
Identities = 41/140 (29%), Positives = 61/140 (43%)
Frame = -1
Query: 528 NNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVD 349
N+YG + G + G+ G N YGS +NN+G G+ NG SG G T D
Sbjct: 305 NSYGRNRGGGNEGGDQWGSNNNGGDNYGSELSNNWGGSNGGS--GSNGGSGG-GNT---D 358
Query: 348 DDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNK 169
+D + GS + G+S N G G G N +D G N+D
Sbjct: 359 ND-NWGS--NNGNSGGSWGNGGTGGSGGSGGGNWGDNDNYGSSNKWNGNGNQDNDNDNFG 415
Query: 168 SRSNRDGFVGVNKSRSNGDG 109
+++G+ G N +R++G G
Sbjct: 416 GGYSKNGY-GSNNNRNDGWG 434
Score = 33.1 bits (72), Expect = 0.14
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 1/154 (0%)
Frame = -1
Query: 567 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNIN 388
G S+ GS + G+ D+ D G +G + G+G + G +G+ N
Sbjct: 340 GGSNGGSGSNGGSGGGNTDN---DNWGSNNGNSGGSWGNGGTGGSGGSGGGNWGDNDNY- 395
Query: 387 GISGNLGRTVHVDDDLDEGSAISAGDSHRGT-FNNGRSNRDGLVGVNKSRSDGDGLVGVN 211
G S + D+D D G S G NN R++ G N + ++ + G
Sbjct: 396 GSSNKWNGNGNQDNDNDN---FGGGYSKNGYGSNNNRNDGWGSSSSNNNNNNNNNNNGGT 452
Query: 210 KSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGDG 109
SN G G N + + DG + + NG G
Sbjct: 453 GGYSNNGGGWGSNNNNNGNDGNNWESNNGGNGGG 486
Score = 27.5 bits (58), Expect = 7.2
Identities = 35/163 (21%), Positives = 58/163 (35%), Gaps = 8/163 (4%)
Frame = -1
Query: 573 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLN 394
G SGS G N D++G + + N G N+G N +
Sbjct: 340 GGSNGGSGSNGGSGGGNTDNDNWGSNNGNSGGSWGNGGTGGSGGSGGGNWGDN--DNYGS 397
Query: 393 INGISGNLGRTVHVDDDLDEGSAISAGDSHRG--------TFNNGRSNRDGLVGVNKSRS 238
N +GN G + +D+ G + + S+ + NN +N + G S
Sbjct: 398 SNKWNGN-GNQDNDNDNFGGGYSKNGYGSNNNRNDGWGSSSSNNNNNNNNNNNGGTGGYS 456
Query: 237 DGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGDG 109
+ G G N + + DG+ + + N G N S +G
Sbjct: 457 NNGGGWGSNNNNNGNDGNNWESNNGGNGGGGDNWNNGNSGNNG 499
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 41.5 bits (93), Expect = 4e-04
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 13/158 (8%)
Frame = -1
Query: 543 DDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSG----ENNNFGQR------LFGNVLN 394
D G+NN G D++G + + G GSG +N+N+G +GN
Sbjct: 319 DQWGSNNNGGDNYGSELSNNWGGSNGGSGSNGGSGGGNTDNDNWGSNNGNSGGSWGN--G 376
Query: 393 INGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNN---GRSNRDGLVGVNKSRSDGDGL 223
G SG G D+D S G+ ++ N+ G +++G G N +R+DG G
Sbjct: 377 GTGGSGGSGGGNWGDNDNYGSSNKWNGNGNQDNDNDNFGGGYSKNG-YGSNNNRNDGWGS 435
Query: 222 VGVNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGDG 109
N + +N + + G SN G G N + + DG
Sbjct: 436 SSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNNGNDG 473
Score = 35.9 bits (79), Expect = 0.020
Identities = 34/137 (24%), Positives = 55/137 (40%)
Frame = -1
Query: 567 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNIN 388
G++D + D+ NN + ++ +G RN D Y NN N N
Sbjct: 155 GENDDWNNGDQNNNN---NFNSKNNRMNKYGNRN-DGDDYNGNGNNQDNWNSGSNSGGYN 210
Query: 387 GISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNK 208
G G G + ++ +E + +++R + NN +N G N +DG+ G
Sbjct: 211 GGGGGSGGGSNWNNGDNENDGWNNNNNNRKSNNNNNNNYGNSWGTND--NDGNSWKGSGN 268
Query: 207 SRSNRDGHVGVNKSRSN 157
S N D G + S SN
Sbjct: 269 SNGNSDNWGGSSGSGSN 285
Score = 35.5 bits (78), Expect = 0.027
Identities = 41/140 (29%), Positives = 61/140 (43%)
Frame = -1
Query: 528 NNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVD 349
N+YG + G + G+ G N YGS +NN+G G+ NG SG G T D
Sbjct: 305 NSYGRNRGGGNEGGDQWGSNNNGGDNYGSELSNNWGGSNGGS--GSNGGSGG-GNT---D 358
Query: 348 DDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNK 169
+D + GS + G+S N G G G N +D G N+D
Sbjct: 359 ND-NWGS--NNGNSGGSWGNGGTGGSGGSGGGNWGDNDNYGSSNKWNGNGNQDNDNDNFG 415
Query: 168 SRSNRDGFVGVNKSRSNGDG 109
+++G+ G N +R++G G
Sbjct: 416 GGYSKNGY-GSNNNRNDGWG 434
Score = 33.1 bits (72), Expect = 0.14
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 1/154 (0%)
Frame = -1
Query: 567 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNIN 388
G S+ GS + G+ D+ D G +G + G+G + G +G+ N
Sbjct: 340 GGSNGGSGSNGGSGGGNTDN---DNWGSNNGNSGGSWGNGGTGGSGGSGGGNWGDNDNY- 395
Query: 387 GISGNLGRTVHVDDDLDEGSAISAGDSHRGT-FNNGRSNRDGLVGVNKSRSDGDGLVGVN 211
G S + D+D D G S G NN R++ G N + ++ + G
Sbjct: 396 GSSNKWNGNGNQDNDNDN---FGGGYSKNGYGSNNNRNDGWGSSSSNNNNNNNNNNNGGT 452
Query: 210 KSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGDG 109
SN G G N + + DG + + NG G
Sbjct: 453 GGYSNNGGGWGSNNNNNGNDGNNWESNNGGNGGG 486
Score = 27.5 bits (58), Expect = 7.2
Identities = 35/163 (21%), Positives = 58/163 (35%), Gaps = 8/163 (4%)
Frame = -1
Query: 573 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLN 394
G SGS G N D++G + + N G N+G N +
Sbjct: 340 GGSNGGSGSNGGSGGGNTDNDNWGSNNGNSGGSWGNGGTGGSGGSGGGNWGDN--DNYGS 397
Query: 393 INGISGNLGRTVHVDDDLDEGSAISAGDSHRG--------TFNNGRSNRDGLVGVNKSRS 238
N +GN G + +D+ G + + S+ + NN +N + G S
Sbjct: 398 SNKWNGN-GNQDNDNDNFGGGYSKNGYGSNNNRNDGWGSSSSNNNNNNNNNNNGGTGGYS 456
Query: 237 DGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGDG 109
+ G G N + + DG+ + + N G N S +G
Sbjct: 457 NNGGGWGSNNNNNGNDGNNWESNNGGNGGGGDNWNNGNSGNNG 499
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.003
Identities = 40/156 (25%), Positives = 56/156 (35%), Gaps = 1/156 (0%)
Frame = -1
Query: 573 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLN 394
G G ++G +NN G G + G G N +GSG G GN
Sbjct: 37 GFGSGNAGGTGFGSSNNGGSGFGGNNNVGPRFGNGNAGGTGFGSGNAGGTGFG-SGNAGG 95
Query: 393 INGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSD-GDGLVG 217
SGN G T + G+ +G++ F +G + GL N + G G G
Sbjct: 96 TGFGSGNAGGTGFGSGNAG-GTGFGSGNAGGTGFGSGNAGGTGLGSGNAGGTGFGSGNAG 154
Query: 216 VNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGDG 109
S G G ++ GF G K+ G G
Sbjct: 155 GTGFGSGNAGGTGFGSGKAGGTGF-GSGKAGGTGFG 189
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.003
Identities = 40/156 (25%), Positives = 56/156 (35%), Gaps = 1/156 (0%)
Frame = -1
Query: 573 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLN 394
G G ++G +NN G G + G G N +GSG G GN
Sbjct: 37 GFGSGNAGGTGFGSSNNGGSGFGGNNNVGPRFGNGNAGGTGFGSGNAGGTGFG-SGNAGG 95
Query: 393 INGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSD-GDGLVG 217
SGN G T + G+ +G++ F +G + GL N + G G G
Sbjct: 96 TGFGSGNAGGTGFGSGNAG-GTGFGSGNAGGTGFGSGNAGGTGLGSGNAGGTGFGSGNAG 154
Query: 216 VNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGDG 109
S G G ++ GF G K+ G G
Sbjct: 155 GTGFGSGNAGGTGFGSGKAGGTGF-GSGKAGGTGFG 189
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 38.3 bits (85), Expect = 0.004
Identities = 40/156 (25%), Positives = 55/156 (35%), Gaps = 1/156 (0%)
Frame = -1
Query: 573 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLN 394
G G ++G +NN G G + G G N +GSG G GN
Sbjct: 37 GFGSGNAGGTGFGSSNNGGSGFGGNNNVGPRFGNGNAGGTGFGSGNAGGTGFG-SGNAGG 95
Query: 393 INGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSD-GDGLVG 217
SGN G T + G+ G++ F +G + GL N + G G G
Sbjct: 96 TGFGSGNAGGTGFGSGNAG-GTGFGGGNAGGTGFGSGNAGGTGLGSGNAGGTGFGSGNAG 154
Query: 216 VNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGDG 109
S G G ++ GF G K+ G G
Sbjct: 155 GTGFGSGNAGGTGFGSGKAGGTGF-GSGKAGGTGFG 189
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 37.9 bits (84), Expect = 0.005
Identities = 29/66 (43%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = -2
Query: 311 TVTGAPSTMAGP-TEMGS*VSTRAGPTEMGS*VSTRAGP-TEMGT*VSTRAGP-TEMGS* 141
+ T PST +GP T S VST +GP+ S ST +GP T G+ ST +GP T G
Sbjct: 552 STTSGPSTSSGPSTASRSTVSTTSGPSTT-SGPSTTSGPSTTSGSTKSTTSGPSTTSGKN 610
Query: 140 VSTRAG 123
+ST +G
Sbjct: 611 ISTVSG 616
Score = 34.3 bits (75), Expect = 0.062
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = -2
Query: 314 VTVTGAPSTMAGPTEMG-S*VSTRAGP-TEMGS*VSTRAGPTEMGT*VSTRAGP-TEMGS 144
V+ T ST +G T+ S ST +GP T S VST +GP+ ST +GP T GS
Sbjct: 537 VSTTPGASTTSGSTQSTTSGPSTSSGPSTASRSTVSTTSGPSTTSG-PSTTSGPSTTSGS 595
Query: 143 *VSTRAGPT 117
ST +GP+
Sbjct: 596 TKSTTSGPS 604
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -2
Query: 314 VTVTGAPSTMAGPTEMGS*VSTRAGP-TEMGS*VSTRAGP-TEMGT*VSTRAG 162
V+ T PST +GP ST +GP T GS ST +GP T G +ST +G
Sbjct: 571 VSTTSGPSTTSGP-------STTSGPSTTSGSTKSTTSGPSTTSGKNISTVSG 616
>Z66500-14|CAA91313.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 36.3 bits (80), Expect = 0.015
Identities = 40/150 (26%), Positives = 55/150 (36%), Gaps = 1/150 (0%)
Frame = -1
Query: 555 SGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISG 376
+G+ D G N + D G G N G G + N G N G G
Sbjct: 547 NGTGDGDGDGNGNGNGLTGDGNGTGDGDNNESGNGNGDGSDKNSGAGAGTKPENREGGDG 606
Query: 375 NLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSN 196
N T + D ++ S G G N+ G G + + DG G N S +
Sbjct: 607 NGNGTGDGNGDGNDNGNGSKGLGTGSGDGKGEGNKSGTPGKSDGKEDG---AGSNGSGNG 663
Query: 195 RDGHVGVNKSRSNRDGFVGVNKS-RSNGDG 109
++G NKS + G G KS +GDG
Sbjct: 664 KEG--DGNKSGGSGKGGAGNGKSGDGSGDG 691
Score = 35.1 bits (77), Expect = 0.036
Identities = 41/149 (27%), Positives = 58/149 (38%), Gaps = 1/149 (0%)
Frame = -1
Query: 552 GSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGN 373
G DD GT+ G + G + G+ G + D + G+G+ N R G+ GN
Sbjct: 457 GDEDDDGTDG-GSKESGNNGKGKGKGSGDGDGNRNGNGDGNG---RPKGD--------GN 504
Query: 372 LGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRD-GLVGVNKSRSDGDGLVGVNKSRSN 196
+ +H DD D G + +G NG + D G DGDG N +
Sbjct: 505 IKINIHSPDDNDLLEKDENGPNGKGGAGNGNGDGDKDNNGKGNGTGDGDGDGNGNGNGLT 564
Query: 195 RDGHVGVNKSRSNRDGFVGVNKSRSNGDG 109
DG+ G +N G NGDG
Sbjct: 565 GDGN-GTGDGDNNESG-------NGNGDG 585
Score = 29.9 bits (64), Expect = 1.3
Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 8/121 (6%)
Frame = -1
Query: 447 GSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAIS-AGDSHRGTFNNGRSNR 271
G G +N G + G GN T D ++G+ + +G+ G N +
Sbjct: 616 GDGNDNGNGSKGLGTGSGDGKGEGNKSGTPGKSDGKEDGAGSNGSGNGKEGDGNKSGGSG 675
Query: 270 DGLVGVNKS-------RSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGD 112
G G KS +++G+G G K ++ + G N R G + G+
Sbjct: 676 KGGAGNGKSGDGSGDGKNNGNGGTGDGKDKNGKGSGSGDNDKSGTRAAGKGNAEGNGKGN 735
Query: 111 G 109
G
Sbjct: 736 G 736
>Z49968-13|CAA90265.2| 1169|Caenorhabditis elegans Hypothetical
protein T05C12.10 protein.
Length = 1169
Score = 36.3 bits (80), Expect = 0.015
Identities = 40/150 (26%), Positives = 55/150 (36%), Gaps = 1/150 (0%)
Frame = -1
Query: 555 SGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISG 376
+G+ D G N + D G G N G G + N G N G G
Sbjct: 547 NGTGDGDGDGNGNGNGLTGDGNGTGDGDNNESGNGNGDGSDKNSGAGAGTKPENREGGDG 606
Query: 375 NLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSN 196
N T + D ++ S G G N+ G G + + DG G N S +
Sbjct: 607 NGNGTGDGNGDGNDNGNGSKGLGTGSGDGKGEGNKSGTPGKSDGKEDG---AGSNGSGNG 663
Query: 195 RDGHVGVNKSRSNRDGFVGVNKS-RSNGDG 109
++G NKS + G G KS +GDG
Sbjct: 664 KEG--DGNKSGGSGKGGAGNGKSGDGSGDG 691
Score = 35.1 bits (77), Expect = 0.036
Identities = 41/149 (27%), Positives = 58/149 (38%), Gaps = 1/149 (0%)
Frame = -1
Query: 552 GSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGN 373
G DD GT+ G + G + G+ G + D + G+G+ N R G+ GN
Sbjct: 457 GDEDDDGTDG-GSKESGNNGKGKGKGSGDGDGNRNGNGDGNG---RPKGD--------GN 504
Query: 372 LGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRD-GLVGVNKSRSDGDGLVGVNKSRSN 196
+ +H DD D G + +G NG + D G DGDG N +
Sbjct: 505 IKINIHSPDDNDLLEKDENGPNGKGGAGNGNGDGDKDNNGKGNGTGDGDGDGNGNGNGLT 564
Query: 195 RDGHVGVNKSRSNRDGFVGVNKSRSNGDG 109
DG+ G +N G NGDG
Sbjct: 565 GDGN-GTGDGDNNESG-------NGNGDG 585
Score = 29.9 bits (64), Expect = 1.3
Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 8/121 (6%)
Frame = -1
Query: 447 GSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAIS-AGDSHRGTFNNGRSNR 271
G G +N G + G GN T D ++G+ + +G+ G N +
Sbjct: 616 GDGNDNGNGSKGLGTGSGDGKGEGNKSGTPGKSDGKEDGAGSNGSGNGKEGDGNKSGGSG 675
Query: 270 DGLVGVNKS-------RSDGDGLVGVNKSRSNRDGHVGVNKSRSNRDGFVGVNKSRSNGD 112
G G KS +++G+G G K ++ + G N R G + G+
Sbjct: 676 KGGAGNGKSGDGSGDGKNNGNGGTGDGKDKNGKGSGSGDNDKSGTRAAGKGNAEGNGKGN 735
Query: 111 G 109
G
Sbjct: 736 G 736
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 35.5 bits (78), Expect = 0.027
Identities = 26/90 (28%), Positives = 43/90 (47%)
Frame = -1
Query: 573 GLGKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLN 394
G G +SG+ + N+ G ++G + +G +G N G+G NN G GN N
Sbjct: 200 GSGSGNSGNSSNNN-NSSGNSNYGSNNSGSGNGNSNSGNGNSGNGNGNNAGNSGNGNG-N 257
Query: 393 INGISGNLGRTVHVDDDLDEGSAISAGDSH 304
NG +GN G + + + G+ + G+ H
Sbjct: 258 SNGNNGN-GSNGNGNGNNGNGNNGNNGNGH 286
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = -1
Query: 333 GSAISAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKSRSNR 154
GS S + + NN S+ + G N S S N + N +G+ N N
Sbjct: 197 GSVGSGSGNSGNSSNNNNSSGNSNYGSNNSGSGNGNSNSGNGNSGNGNGNNAGNSGNGNG 256
Query: 153 DGFVGVNKSRSNGDG 109
+ G N + SNG+G
Sbjct: 257 NSN-GNNGNGSNGNG 270
>Z92849-5|CAB07430.1| 163|Caenorhabditis elegans Hypothetical
protein H12D21.6 protein.
Length = 163
Score = 31.9 bits (69), Expect = 0.33
Identities = 24/93 (25%), Positives = 38/93 (40%)
Frame = -1
Query: 564 KSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQRLFGNVLNING 385
+S G + + + G G + GF N + + G G NN Q FG + +G
Sbjct: 63 QSGFGGQSQQSSGFGGSSSNGMGSSNSQGGFGNQESQSSGMGSNNQ-RQSGFGGQMGSSG 121
Query: 384 ISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNN 286
SG+ G + GS+ +G S G N+
Sbjct: 122 SSGSSGSSSQSGFGGQMGSSGQSGSSSNGMGNS 154
>Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical
protein F09C8.2 protein.
Length = 762
Score = 31.1 bits (67), Expect = 0.58
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 181 YVPISVGPALVDTYEPISVGPALVDTYEPISVGPAIVEGAPVTVTGADGTP-LVQIIINV 357
Y PIS+ D + P L+DT++P+ P I PVTV+ P L+
Sbjct: 435 YPPISLNTRY-DYDSDRDILPLLLDTFQPLPAPPQI---PPVTVSVPVSVPELLTSTKKP 490
Query: 358 NRPSEIAADPVDVEDIAEEPL 420
++P+++ A P+ ++++ L
Sbjct: 491 SQPAKVPAAPIKAPRLSDQEL 511
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 124 PALVDTYEPISVGPAL--VDTYVPISVGPALVDTYEP 228
P L+DT++P+ P + V VP+SV L T +P
Sbjct: 454 PLLLDTFQPLPAPPQIPPVTVSVPVSVPELLTSTKKP 490
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 367 SEIAADPVDVEDIAEEPLPEVVILPTP 447
S AA P DV D A E P+V++ PTP
Sbjct: 556 SAAAAAPEDVPDAAPEDPPKVILKPTP 582
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -1
Query: 567 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFG 421
G S +D G +++G DD G D G H D G N+N G
Sbjct: 360 GHGHSHDHNDHG-HSHGHDDHGHDSHGHSHDHNEHDHGHSHGGNNDNHG 407
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -1
Query: 567 GKSDSGSRDDRGTNNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFG 421
G S +D G +++G DD G D G H D G N+N G
Sbjct: 378 GHGHSHDHNDHG-HSHGHDDHGHDSHGHSHDHNEHDHGHSHGGNNDNHG 425
>AF036693-4|AAK29786.1| 360|Caenorhabditis elegans Hypothetical
protein C49A9.6 protein.
Length = 360
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 456 RKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVD 349
RKYGS N FG+ L G+ N + + G+ VH++
Sbjct: 308 RKYGSAFNKYFGEILEGDSENTKLSTDHNGKMVHIE 343
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -1
Query: 477 GFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRG 298
G R + R +G G R + I G+ G G + D +G++ G G
Sbjct: 302 GPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGG 361
Query: 297 TFNNGRSNRDGLVG 256
TFN+G GL G
Sbjct: 362 TFNDGAPGPPGLPG 375
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -1
Query: 477 GFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRG 298
G R + R +G G R + I G+ G G + D +G++ G G
Sbjct: 301 GPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGG 360
Query: 297 TFNNGRSNRDGLVG 256
TFN+G GL G
Sbjct: 361 TFNDGAPGPPGLPG 374
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -1
Query: 477 GFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRG 298
G R + R +G G R + I G+ G G + D +G++ G G
Sbjct: 301 GPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGG 360
Query: 297 TFNNGRSNRDGLVG 256
TFN+G GL G
Sbjct: 361 TFNDGAPGPPGLPG 374
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -1
Query: 477 GFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRG 298
G R + R +G G R + I G+ G G + D +G++ G G
Sbjct: 302 GPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGG 361
Query: 297 TFNNGRSNRDGLVG 256
TFN+G GL G
Sbjct: 362 TFNDGAPGPPGLPG 375
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -1
Query: 477 GFRNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRG 298
G R + R +G G R + I G+ G G + D +G++ G G
Sbjct: 338 GPRGKEGRPGNAGPPGFKGDRGLDGLGGIPGLPGQKGEAGYPGRDGPKGNSGPPGPPGGG 397
Query: 297 TFNNGRSNRDGLVG 256
TFN+G GL G
Sbjct: 398 TFNDGAPGPPGLPG 411
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.1 bits (62), Expect = 2.3
Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
Frame = -1
Query: 306 HRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSN----RDGHVGVNKSRSNRDGFVG 139
HRG + G G + R G G G + SRS R GH G R R G G
Sbjct: 280 HRGGRHGGHGRHGSCSGSPRGRH-GHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRHGGHG 338
Query: 138 VNKSRSNGDG 109
+ SRS G
Sbjct: 339 RHGSRSGSPG 348
>Z93381-1|CAB07604.1| 509|Caenorhabditis elegans Hypothetical
protein F28G4.1 protein.
Length = 509
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -1
Query: 528 NNYGLDDFGEDRAGELHGFRNVDFRKYGSGENNNFGQR 415
N Y ++F ED+ G H + ++ F +G N GQ+
Sbjct: 422 NQYNPENFSEDKIGSRHAYSDIPF---SAGPRNCIGQK 456
>AF039712-1|AAK21402.2| 239|Caenorhabditis elegans 2 (zwei)
ig-domain protein protein7 protein.
Length = 239
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 414 LFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGR 280
L+ N+ N+ + NLG H+D + E + +S G +GT N G+
Sbjct: 46 LYANIQNLWCGAQNLGE--HIDVEYGEFTRLSDGKVFKGTVNQGK 88
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 372 LGRTVHVDDDLDEGSAISAGDSHRGTFNN 286
+ RT++V+DD G S GDS +GT N+
Sbjct: 698 IDRTLYVEDD---GDGTSLGDSKKGTLNS 723
>U13645-10|AAM15546.1| 418|Caenorhabditis elegans Hypothetical
protein C05D10.4c protein.
Length = 418
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -1
Query: 381 SGNLGRTVHVDDDLDEGSAI--SAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNK 208
+G T+ VDDD + + RGT NN R + V + KS D D +
Sbjct: 134 TGEFKTTITVDDDHQPTAVMRPKKESDTRGTLNNNRYSFQSCVQLRKSCPDLD-----ST 188
Query: 207 SRSNRDGHVGVNKSRSNR 154
+ SN + H V+K R+ R
Sbjct: 189 AMSNMEQH-RVSKKRTRR 205
>U13645-9|AAM15545.1| 597|Caenorhabditis elegans Hypothetical
protein C05D10.4b protein.
Length = 597
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -1
Query: 381 SGNLGRTVHVDDDLDEGSAI--SAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNK 208
+G T+ VDDD + + RGT NN R + V + KS D D +
Sbjct: 313 TGEFKTTITVDDDHQPTAVMRPKKESDTRGTLNNNRYSFQSCVQLRKSCPDLD-----ST 367
Query: 207 SRSNRDGHVGVNKSRSNR 154
+ SN + H V+K R+ R
Sbjct: 368 AMSNMEQH-RVSKKRTRR 384
>U13645-8|AAM15544.1| 565|Caenorhabditis elegans Hypothetical
protein C05D10.4a protein.
Length = 565
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = -1
Query: 381 SGNLGRTVHVDDDLDEGSAI--SAGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNK 208
+G T+ VDDD + + RGT NN R + V + KS D D +
Sbjct: 281 TGEFKTTITVDDDHQPTAVMRPKKESDTRGTLNNNRYSFQSCVQLRKSCPDLD-----ST 335
Query: 207 SRSNRDGHVGVNKSRSNR 154
+ SN + H V+K R+ R
Sbjct: 336 AMSNMEQH-RVSKKRTRR 352
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 372 LGRTVHVDDDLDEGSAISAGDSHRGTFNN 286
+ RT++V+DD G S GDS +GT N+
Sbjct: 698 IDRTLYVEDD---GDGTSLGDSKKGTLNS 723
>AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical
protein Y73E7A.2 protein.
Length = 463
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 420 QRLFGNVLNINGISGNLGRTVHVDDDLDEGSAISAGDSHRGTFNNGRSNRD 268
+ LFG++ I+G+ GN ++ ++D DE I D + N D
Sbjct: 63 KELFGDISEISGLQGNFDKS-ESEEDEDEEEKIDNFDESEPEIEDEEENED 112
>Z68315-6|CAA92671.1| 219|Caenorhabditis elegans Hypothetical
protein F28C6.5 protein.
Length = 219
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 349 INVNRPSEIAADPVDVEDIAEEPL-PEVVILPTPVFPE 459
++V P ++ A P+D E + EPL P +ILP+ + E
Sbjct: 81 LHVPEPQDVVAVPLDEEALHGEPLFPPELILPSELAAE 118
>Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical
protein W01C9.3 protein.
Length = 792
Score = 27.5 bits (58), Expect = 7.2
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 14/116 (12%)
Frame = -1
Query: 471 RNVDFRKYGSGENNNFGQRLFGNVLNINGISGNLGRTVH--------VDDDLDEGSAIS- 319
+N+ + S + + + + G V+N+NG++GN G T + + G +IS
Sbjct: 533 QNIQHQMQQSRQPSGYHPAVNG-VVNLNGVNGNNGNTEYNVQPYQGTGNQQTQNGQSISP 591
Query: 318 -----AGDSHRGTFNNGRSNRDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNKS 166
A S N+G +N+ V S ++ + + G S R G N +
Sbjct: 592 EMRRQAPYSFNSNINSGYTNQQPGVSSGNSNTNSNNMNGFGAQPSYRTSQFGFNNN 647
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -1
Query: 570 LGKSDSGSRDDRGTNNY-GLDDFGEDRAGELHGFRNVDFRKYGSGEN--NNFGQRLFGNV 400
+G D SRD G NNY F +D E+ R + ++ N F QR+ NV
Sbjct: 70 MGSWDEYSRDTSGENNYHHTSSFDDDLLLEIDSSRGAAVARLDRTQDDLNKFRQRIDNNV 129
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 356 TLMMIWTRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VST 210
T ++ T P+ PVT T PS+ PT + V+ A T V+T
Sbjct: 568 TTSLLTTLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTT 616
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 356 TLMMIWTRGVPSAPVTVTGAPSTMAGPTEMGS*VSTRAGPTEMGS*VST 210
T ++ T P+ PVT T PS+ PT + V+ A T V+T
Sbjct: 624 TTSLLTTLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTT 672
>U41034-4|AAY43995.1| 385|Caenorhabditis elegans Hypothetical
protein M02D8.7 protein.
Length = 385
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = +1
Query: 163 PALVDTYVPISVGPALVDTYEPISVGPALVDTYEPISVGPAIVE--GAPVTVTGA---DG 327
P LV P++ PA ++ + VDTYE + P I + G P+++TG G
Sbjct: 62 PDLVIYEGPMNKRPAHNMQFQMREIKAEPVDTYETTTPAPTIQQPPGFPMSITGGIPQMG 121
Query: 328 TPLVQ 342
PL+Q
Sbjct: 122 PPLLQ 126
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 265 PISVGPAIVEGAPVTV-TGADGTPLVQIIINVNRPSEIAADPVDVEDIAEEPLPEVVILP 441
P V P + PVT AD P V + SE +PVDV+ P+V + P
Sbjct: 555 PARVPPQVPSQVPVTGGVAADEPPPPCSYSPVAQSSESKIEPVDVKPRVAPVPPQVPVTP 614
Query: 442 T 444
T
Sbjct: 615 T 615
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 265 PISVGPAIVEGAPVTV-TGADGTPLVQIIINVNRPSEIAADPVDVEDIAEEPLPEVVILP 441
P V P + PVT AD P V + SE +PVDV+ P+V + P
Sbjct: 555 PARVPPQVPSQVPVTGGVAADEPPPPCSYSPVAQSSESKIEPVDVKPRVAPVPPQVPVTP 614
Query: 442 T 444
T
Sbjct: 615 T 615
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 573 GLGKSDSGSRDDRGTNNYGLDDFGED 496
G G+ ++G R D+G L++FG D
Sbjct: 615 GFGEQENGIRADKGQKPCDLEEFGSD 640
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 27.1 bits (57), Expect = 9.5
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = -1
Query: 282 RSN-RDGLVGVNKSRSDGDGLVGVNKSRSNRDGHVGVNK--SRSNRDGFVGVNKSRSNGD 112
RSN R G ++SRS RS RDG VG N+ RS RD +S D
Sbjct: 239 RSNDRHGRDRRSRSRSQSRDRNRRRDDRSGRDGRVGRNERDDRSGRDERRDDRRSAPTKD 298
Query: 111 GL 106
G+
Sbjct: 299 GI 300
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 573 GLGKSDSGSRDDRGTNNYGLDDFGED 496
G G+ ++G R D+G L++FG D
Sbjct: 615 GFGEQENGIRADKGQKPCDLEEFGSD 640
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.137 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,762,004
Number of Sequences: 27780
Number of extensions: 243608
Number of successful extensions: 720
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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