Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV10b02f
(573 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription fac... 187 3e-47
BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein. 187 3e-47
AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription fac... 187 3e-47
AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription fac... 187 3e-47
AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens ... 187 3e-47
X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3... 180 4e-45
X53281-1|CAA37376.1| 162|Homo sapiens general transcription fac... 180 4e-45
X53280-1|CAA37375.1| 206|Homo sapiens general transcription fac... 180 4e-45
BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription fac... 180 4e-45
BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription fac... 180 4e-45
AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BT... 180 4e-45
BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein. 157 2e-38
M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein. 150 4e-36
M90357-1|AAA58398.1| 158|Homo sapiens basic transcription facto... 100 1e-25
M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein. 111 2e-24
BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein. 87 4e-17
M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein. 50 6e-06
AB023201-1|BAA76828.1| 728|Homo sapiens KIAA0984 protein protein. 30 6.7
>BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 187 bits (455), Expect = 3e-47
Identities = 99/151 (65%), Positives = 107/151 (70%), Gaps = 10/151 (6%)
Frame = +3
Query: 150 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 329
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 330 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 509
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 510 -------AAPKPL---EEDDEVPNLVGNFDE 572
APKP EEDD+VP+LV NFDE
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDE 151
>BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein.
Length = 158
Score = 187 bits (455), Expect = 3e-47
Identities = 99/151 (65%), Positives = 107/151 (70%), Gaps = 10/151 (6%)
Frame = +3
Query: 150 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 329
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 330 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 509
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 510 -------AAPKPL---EEDDEVPNLVGNFDE 572
APKP EEDD+VP+LV NFDE
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDE 151
>AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 187 bits (455), Expect = 3e-47
Identities = 99/151 (65%), Positives = 107/151 (70%), Gaps = 10/151 (6%)
Frame = +3
Query: 150 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 329
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 330 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 509
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 510 -------AAPKPL---EEDDEVPNLVGNFDE 572
APKP EEDD+VP+LV NFDE
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDE 151
>AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 187 bits (455), Expect = 3e-47
Identities = 99/151 (65%), Positives = 107/151 (70%), Gaps = 10/151 (6%)
Frame = +3
Query: 150 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 329
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 330 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 509
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 510 -------AAPKPL---EEDDEVPNLVGNFDE 572
APKP EEDD+VP+LV NFDE
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDE 151
>AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ14844 fis, clone PLACE1000133, highly similar to
TRANSCRIPTION FACTOR BTF3. ).
Length = 158
Score = 187 bits (455), Expect = 3e-47
Identities = 99/151 (65%), Positives = 107/151 (70%), Gaps = 10/151 (6%)
Frame = +3
Query: 150 MNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMI 329
MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIEEVNMI
Sbjct: 1 MNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMI 60
Query: 330 KEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV 509
K+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L+++A
Sbjct: 61 KDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQF 120
Query: 510 -------AAPKPL---EEDDEVPNLVGNFDE 572
APKP EEDD+VP+LV NFDE
Sbjct: 121 PRQVLDSKAPKPEDIDEEDDDVPDLVENFDE 151
>X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3
protein.
Length = 162
Score = 180 bits (437), Expect = 4e-45
Identities = 96/155 (61%), Positives = 105/155 (67%), Gaps = 9/155 (5%)
Frame = +3
Query: 135 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 314
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 315 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 494
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 495 IA-----SSVAAPKPL----EEDDEVPNLVGNFDE 572
+A SV PL ++DDEVP+LV NFDE
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDE 155
>X53281-1|CAA37376.1| 162|Homo sapiens general transcription factor
protein.
Length = 162
Score = 180 bits (437), Expect = 4e-45
Identities = 96/155 (61%), Positives = 105/155 (67%), Gaps = 9/155 (5%)
Frame = +3
Query: 135 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 314
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 315 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 494
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 495 IA-----SSVAAPKPL----EEDDEVPNLVGNFDE 572
+A SV PL ++DDEVP+LV NFDE
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDE 155
>X53280-1|CAA37375.1| 206|Homo sapiens general transcription factor
protein.
Length = 206
Score = 180 bits (437), Expect = 4e-45
Identities = 96/155 (61%), Positives = 105/155 (67%), Gaps = 9/155 (5%)
Frame = +3
Query: 135 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 314
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 104
Query: 315 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 494
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 105 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 164
Query: 495 IA-----SSVAAPKPL----EEDDEVPNLVGNFDE 572
+A SV PL ++DDEVP+LV NFDE
Sbjct: 165 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDE 199
>BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 180 bits (437), Expect = 4e-45
Identities = 96/155 (61%), Positives = 105/155 (67%), Gaps = 9/155 (5%)
Frame = +3
Query: 135 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 314
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 315 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 494
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 495 IA-----SSVAAPKPL----EEDDEVPNLVGNFDE 572
+A SV PL ++DDEVP+LV NFDE
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDE 155
>BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 180 bits (437), Expect = 4e-45
Identities = 96/155 (61%), Positives = 105/155 (67%), Gaps = 9/155 (5%)
Frame = +3
Query: 135 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 314
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 315 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 494
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 495 IA-----SSVAAPKPL----EEDDEVPNLVGNFDE 572
+A SV PL ++DDEVP+LV NFDE
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDE 155
>AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BTF 3
protein.
Length = 162
Score = 180 bits (437), Expect = 4e-45
Identities = 96/155 (61%), Positives = 105/155 (67%), Gaps = 9/155 (5%)
Frame = +3
Query: 135 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 314
+K + MN EKL KLQ+QVRIGGKGT RRKKKVVH TA DD VN I GIE
Sbjct: 1 MKETIMNQEKLAKLQAQVRIGGKGTARRKKKVVHRTATADDKKLQFSLKKLGVNNISGIE 60
Query: 315 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 494
EVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 61 EVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 120
Query: 495 IA-----SSVAAPKPL----EEDDEVPNLVGNFDE 572
+A SV PL ++DDEVP+LV NFDE
Sbjct: 121 LAEALPKQSVDGKAPLATGEDDDDEVPDLVENFDE 155
>BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein.
Length = 153
Score = 157 bits (382), Expect = 2e-38
Identities = 84/134 (62%), Positives = 92/134 (68%), Gaps = 10/134 (7%)
Frame = +3
Query: 201 KGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIEEVNMIKEDGTVIHFNNPKAQAS 380
+GT RRKKKVVH TA DD VN I GIEEVNMIK+DGTVIHFNNPK QAS
Sbjct: 13 QGTARRKKKVVHRTATADDKKLQSSLKKLAVNNIAGIEEVNMIKDDGTVIHFNNPKVQAS 72
Query: 381 LAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRIASSV-------AAPKPL---E 530
L+ANTFAITGH E K TEMLPGILSQLG D L L+++A APKP E
Sbjct: 73 LSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKPEDIDE 132
Query: 531 EDDEVPNLVGNFDE 572
EDD+VP+LV NFDE
Sbjct: 133 EDDDVPDLVENFDE 146
>M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein.
Length = 214
Score = 150 bits (363), Expect = 4e-36
Identities = 80/147 (54%), Positives = 92/147 (62%)
Frame = +3
Query: 132 TLKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGI 311
T +++ KL KLQ+QVRIGGKGT RKKKV H TA DD VN I GI
Sbjct: 30 TCRSTDHEPGKLAKLQAQVRIGGKGTAHRKKKVFHRTATADDKKLQFSLKKLQVNNISGI 89
Query: 312 EEVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLK 491
E+VNM GTVIHFNNPK QASLA NTF ITGH E KQ TEMLP +LSQLG D L L+
Sbjct: 90 EKVNMFTNQGTVIHFNNPKFQASLAVNTFTITGHAEAKQVTEMLPSVLSQLGADSLTSLR 149
Query: 492 RIASSVAAPKPLEEDDEVPNLVGNFDE 572
R+A V +P+ D + P G D+
Sbjct: 150 RLA-EVLPKQPV--DGKAPLATGGDDD 173
>M90357-1|AAA58398.1| 158|Homo sapiens basic transcription factor
3a protein.
Length = 158
Score = 100 bits (239), Expect(2) = 1e-25
Identities = 56/95 (58%), Positives = 62/95 (65%), Gaps = 9/95 (9%)
Frame = +3
Query: 315 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 494
+VNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 67 KVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 126
Query: 495 IA-----SSVAAPKPL----EEDDEVPNLVGNFDE 572
+A SV PL ++DDEVP G F E
Sbjct: 127 LAEALPKQSVDGKAPLATGEDDDDEVP---GGFQE 158
Score = 35.9 bits (79), Expect(2) = 1e-25
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +3
Query: 135 LKNSRMNSEKLKKLQSQVRIGGK 203
+K + MN EKL KLQ+QVRIGGK
Sbjct: 45 MKETIMNQEKLAKLQAQVRIGGK 67
>M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein.
Length = 111
Score = 111 bits (266), Expect = 2e-24
Identities = 61/106 (57%), Positives = 69/106 (65%)
Frame = +3
Query: 135 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 314
+K + MN +KL K Q++V G KGT RKK VVH TA +D VN IPGIE
Sbjct: 1 MKETIMN-QKLTKRQAEVHTGRKGTAHRKK-VVHTTA--EDKKFQFSLKKLGVNNIPGIE 56
Query: 315 EVNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGI 452
EVNM GTVIHFNNP+ QASLAANTF +TGH E KQ TEML I
Sbjct: 57 EVNMFTHQGTVIHFNNPEVQASLAANTFTMTGHAETKQLTEMLLSI 102
>BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein.
Length = 102
Score = 87.0 bits (206), Expect = 4e-17
Identities = 48/95 (50%), Positives = 59/95 (62%), Gaps = 10/95 (10%)
Frame = +3
Query: 318 VNMIKEDGTVIHFNNPKAQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRI 497
+N K T+IHFNNP+ QA LA NTF ITGHGE KQ TEML +L+QL L L+R+
Sbjct: 1 MNQEKLQRTMIHFNNPEVQAFLAVNTFTITGHGETKQLTEMLRSVLNQLAAVSLTSLRRL 60
Query: 498 A-----SSVAAPKPL-----EEDDEVPNLVGNFDE 572
A SV PL ++DDEVP ++ NFDE
Sbjct: 61 AEALPKQSVDGKAPLATGEDDDDDEVPGIMENFDE 95
>M90355-1|AAB04035.1| 67|Homo sapiens BTF3 homologue protein.
Length = 67
Score = 50.0 bits (114), Expect = 6e-06
Identities = 31/72 (43%), Positives = 39/72 (54%)
Frame = +3
Query: 135 LKNSRMNSEKLKKLQSQVRIGGKGTPRRKKKVVHVTAATDDXXXXXXXXXXXVNTIPGIE 314
+K + MN EKL KLQ++V IGG +KKVVH TA +D ++ GIE
Sbjct: 1 MKETIMNQEKLAKLQAKVPIGGTA---HRKKVVHRTATANDKKRQFSLKKLEIS---GIE 54
Query: 315 EVNMIKEDGTVI 350
EVNM TVI
Sbjct: 55 EVNMFTNQATVI 66
>AB023201-1|BAA76828.1| 728|Homo sapiens KIAA0984 protein protein.
Length = 728
Score = 29.9 bits (64), Expect = 6.7
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 227 GCSRYCGHR*QKTAVIAQKVVSEHNSWHRRGKYDQ 331
GCS YCG ++ V+ ++V+ + W++ Y Q
Sbjct: 109 GCSSYCGQEAEQDRVVLKRVLLAYARWNKTVGYCQ 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,523,392
Number of Sequences: 237096
Number of extensions: 1657697
Number of successful extensions: 7335
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 7215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7319
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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